RNA–Protein interactions for RNA: ENST00000380649.7

HADHA-201, Transcript of hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HADHA, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HADHA-201ENST00000380649 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 A0A0D9SFI3 127 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 MBD3O95983 291 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 CHGBP05060 677 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
HADHA-201ENST00000380649 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 SYT1P21579 422 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 MYD88Q99836 296 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 DDX21Q9NR30 783 aaKnown RBP eCLIP12.93□□□□□ -0.34
HADHA-201ENST00000380649 FIBPO43427 364 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
HADHA-201ENST00000380649 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 HYPKQ9NX55 129 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
HADHA-201ENST00000380649 MPNDQ8N594 471 aa12.92□□□□□ -0.34
HADHA-201ENST00000380649 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
HADHA-201ENST00000380649 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.92□□□□□ -0.34
HADHA-201ENST00000380649 RBM8AQ9Y5S9 174 aaKnown RBP12.92□□□□□ -0.34
HADHA-201ENST00000380649 CCDC171Q6TFL3 1326 aa12.92□□□□□ -0.34
HADHA-201ENST00000380649 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
HADHA-201ENST00000380649 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
HADHA-201ENST00000380649 STX6O43752 255 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
HADHA-201ENST00000380649 COPS6Q7L5N1 327 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
HADHA-201ENST00000380649 ADAMTSL3P82987 1691 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 NEURL1BA8MQ27 555 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 GJB2P29033 226 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.344e-7■■■□□ 16.6
HADHA-201ENST00000380649 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
HADHA-201ENST00000380649 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
HADHA-201ENST00000380649 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
HADHA-201ENST00000380649 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
HADHA-201ENST00000380649 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
HADHA-201ENST00000380649 KCNJ4P48050 445 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 ME3Q16798 604 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 EVI5LQ96CN4 794 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 FSD1Q9BTV5 496 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 TSPY26PQ9H489 355 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 UTYO14607 1347 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.34
HADHA-201ENST00000380649 F13A1P00488 732 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 PHKG2P15735 406 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 RUFY2Q8WXA3 655 aa12.9□□□□□ -0.34
HADHA-201ENST00000380649 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
HADHA-201ENST00000380649 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
HADHA-201ENST00000380649 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
HADHA-201ENST00000380649 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
HADHA-201ENST00000380649 TPCN1Q9ULQ1 816 aa12.89□□□□□ -0.35
HADHA-201ENST00000380649 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
HADHA-201ENST00000380649 CSB-PGBD3P0DP91 1061 aa12.89□□□□□ -0.35
HADHA-201ENST00000380649 GCKRQ14397 625 aa12.89□□□□□ -0.35
HADHA-201ENST00000380649 DNM1Q05193 864 aaKnown RBP12.88□□□□□ -0.35
HADHA-201ENST00000380649 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 COL15A1P39059 1388 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 SLC27A2O14975 620 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 CYP27B1O15528 508 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
HADHA-201ENST00000380649 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
HADHA-201ENST00000380649 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
HADHA-201ENST00000380649 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
HADHA-201ENST00000380649 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
HADHA-201ENST00000380649 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
HADHA-201ENST00000380649 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
HADHA-201ENST00000380649 SLFNL1Q499Z3 407 aa12.87□□□□□ -0.35
HADHA-201ENST00000380649 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
HADHA-201ENST00000380649 DBNLQ9UJU6 430 aaKnown RBP12.87□□□□□ -0.35
HADHA-201ENST00000380649 COL18A1P39060 1754 aa12.87□□□□□ -0.35
HADHA-201ENST00000380649 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
HADHA-201ENST00000380649 STK3Q13188 491 aa12.86□□□□□ -0.35
HADHA-201ENST00000380649 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
HADHA-201ENST00000380649 METTL22Q9BUU2 404 aaPredicted RBP12.86□□□□□ -0.35
HADHA-201ENST00000380649 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
HADHA-201ENST00000380649 GLI3P10071 1580 aa12.86□□□□□ -0.35
HADHA-201ENST00000380649 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
HADHA-201ENST00000380649 TFCP2Q12800 502 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms