RNA–Protein interactions for RNA: ENST00000380135.7

LETMD1-202, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-202ENST00000380135 ABCC12Q96J65 1359 aa20.66■□□□□ 0.9
LETMD1-202ENST00000380135 SLC4A2P04920 1241 aa20.65■□□□□ 0.9
LETMD1-202ENST00000380135 RNF123Q5XPI4 1314 aa20.65■□□□□ 0.9
LETMD1-202ENST00000380135 COL11A2P13942 1736 aaPredicted RBP20.65■□□□□ 0.9
LETMD1-202ENST00000380135 ANKRD36CQ5JPF3 1778 aa20.65■□□□□ 0.9
LETMD1-202ENST00000380135 RIC1Q4ADV7 1423 aa20.64■□□□□ 0.9
LETMD1-202ENST00000380135 SLC10A5Q5PT55 438 aa20.64■□□□□ 0.9
LETMD1-202ENST00000380135 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.9
LETMD1-202ENST00000380135 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
LETMD1-202ENST00000380135 TRIM28Q13263 835 aaKnown RBP20.63■□□□□ 0.89
LETMD1-202ENST00000380135 E9PSI1 815 aa20.63■□□□□ 0.89
LETMD1-202ENST00000380135 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
LETMD1-202ENST00000380135 PRPF40BQ6NWY9 871 aaKnown RBP20.62■□□□□ 0.89
LETMD1-202ENST00000380135 ZNF784Q8NCA9 323 aaPredicted RBP20.62■□□□□ 0.89
LETMD1-202ENST00000380135 NLRP3Q96P20 1036 aa20.62■□□□□ 0.89
LETMD1-202ENST00000380135 SH3TC1Q8TE82 1336 aa20.61■□□□□ 0.89
LETMD1-202ENST00000380135 C21orf2O43822 256 aa20.61■□□□□ 0.89
LETMD1-202ENST00000380135 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
LETMD1-202ENST00000380135 KSR2Q6VAB6 950 aa20.61■□□□□ 0.89
LETMD1-202ENST00000380135 G2E3Q7L622 706 aa20.61■□□□□ 0.89
LETMD1-202ENST00000380135 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
LETMD1-202ENST00000380135 SLFN5Q08AF3 891 aa20.6■□□□□ 0.89
LETMD1-202ENST00000380135 RPGRQ92834 1020 aaKnown RBP20.6■□□□□ 0.89
LETMD1-202ENST00000380135 MYD88Q99836 296 aa20.6■□□□□ 0.89
LETMD1-202ENST00000380135 METTL22Q9BUU2 404 aaPredicted RBP20.6■□□□□ 0.89
LETMD1-202ENST00000380135 MAP3K2Q9Y2U5 619 aa20.6■□□□□ 0.89
LETMD1-202ENST00000380135 ARFGEF2Q9Y6D5 1785 aa20.6■□□□□ 0.89
LETMD1-202ENST00000380135 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 HOXA10P31260 410 aaPredicted RBP20.59■□□□□ 0.89
LETMD1-202ENST00000380135 SYNE4Q8N205 404 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 TNRC6CQ9HCJ0 1690 aaKnown RBP20.59■□□□□ 0.89
LETMD1-202ENST00000380135 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 SOGA3Q5TF21 947 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 ZNF428Q96B54 188 aa20.59■□□□□ 0.89
LETMD1-202ENST00000380135 HCLS1P14317 486 aaPredicted RBP20.58■□□□□ 0.88
LETMD1-202ENST00000380135 FLIIQ13045 1269 aa20.58■□□□□ 0.88
LETMD1-202ENST00000380135 CCDC191Q8NCU4 936 aa20.58■□□□□ 0.88
LETMD1-202ENST00000380135 C7orf43Q8WVR3 580 aa20.58■□□□□ 0.88
LETMD1-202ENST00000380135 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.88
LETMD1-202ENST00000380135 C9orf131Q5VYM1 1079 aa20.57■□□□□ 0.88
LETMD1-202ENST00000380135 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
LETMD1-202ENST00000380135 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
LETMD1-202ENST00000380135 CRAMP1Q96RY5 1269 aa20.57■□□□□ 0.88
LETMD1-202ENST00000380135 ADCY9O60503 1353 aa20.57■□□□□ 0.88
LETMD1-202ENST00000380135 CACNA1FO60840 1977 aa20.56■□□□□ 0.88
LETMD1-202ENST00000380135 RASSF7Q02833 373 aa20.56■□□□□ 0.88
LETMD1-202ENST00000380135 NFKBIEO00221 500 aa20.55■□□□□ 0.88
LETMD1-202ENST00000380135 NEXNQ0ZGT2 675 aa20.55■□□□□ 0.88
LETMD1-202ENST00000380135 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
LETMD1-202ENST00000380135 CWC25Q9NXE8 425 aaPredicted RBP20.55■□□□□ 0.88
LETMD1-202ENST00000380135 RNF181Q9P0P0 153 aa20.55■□□□□ 0.88
LETMD1-202ENST00000380135 TRMT2AQ8IZ69 625 aaKnown RBP20.55■□□□□ 0.88
LETMD1-202ENST00000380135 ZBTB38Q8NAP3 1195 aaPredicted RBP20.55■□□□□ 0.88
LETMD1-202ENST00000380135 CACNA1SQ13698 1873 aa20.54■□□□□ 0.88
LETMD1-202ENST00000380135 LMNB1P20700 586 aa20.54■□□□□ 0.88
LETMD1-202ENST00000380135 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
LETMD1-202ENST00000380135 IRS4O14654 1257 aaPredicted RBP20.53■□□□□ 0.88
LETMD1-202ENST00000380135 IGKV5-2P06315 115 aa20.53■□□□□ 0.88
LETMD1-202ENST00000380135 RTL5Q5HYW3 569 aaPredicted RBP20.53■□□□□ 0.88
LETMD1-202ENST00000380135 LTBP3Q9NS15 1303 aa20.53■□□□□ 0.88
LETMD1-202ENST00000380135 PCCAP05165 728 aaPredicted RBP20.52■□□□□ 0.88
LETMD1-202ENST00000380135 HSP90B1P14625 803 aaKnown RBP20.52■□□□□ 0.88
LETMD1-202ENST00000380135 DNAAF4Q8WXU2 420 aa20.52■□□□□ 0.88
LETMD1-202ENST00000380135 TAOK3Q9H2K8 898 aa20.52■□□□□ 0.88
LETMD1-202ENST00000380135 SBF1O95248 1867 aa20.52■□□□□ 0.87
LETMD1-202ENST00000380135 PRELPP51888 382 aa20.51■□□□□ 0.87
LETMD1-202ENST00000380135 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
LETMD1-202ENST00000380135 RTKN2Q8IZC4 609 aa20.51■□□□□ 0.87
LETMD1-202ENST00000380135 SF3B3Q15393 1217 aaKnown RBP20.51■□□□□ 0.87
LETMD1-202ENST00000380135 FER1L6Q2WGJ9 1857 aa20.51■□□□□ 0.87
LETMD1-202ENST00000380135 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
LETMD1-202ENST00000380135 NEURL1BA8MQ27 555 aa20.5■□□□□ 0.87
LETMD1-202ENST00000380135 PPEF1O14829 653 aaPredicted RBP20.5■□□□□ 0.87
LETMD1-202ENST00000380135 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
LETMD1-202ENST00000380135 OLFM4Q6UX06 510 aa20.5■□□□□ 0.87
LETMD1-202ENST00000380135 BBOX1O75936 387 aa20.49■□□□□ 0.87
LETMD1-202ENST00000380135 LINS1Q8NG48 757 aa20.49■□□□□ 0.87
LETMD1-202ENST00000380135 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-202ENST00000380135 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-202ENST00000380135 GPBP1L1Q9HC44 474 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-202ENST00000380135 ABCC4O15439 1325 aa20.49■□□□□ 0.87
LETMD1-202ENST00000380135 LAMB2P55268 1798 aa20.49■□□□□ 0.87
LETMD1-202ENST00000380135 DDX60Q8IY21 1712 aaKnown RBP20.48■□□□□ 0.87
LETMD1-202ENST00000380135 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
LETMD1-202ENST00000380135 FKBP4Q02790 459 aaKnown RBP eCLIP20.48■□□□□ 0.87
LETMD1-202ENST00000380135 GRIPAP1Q4V328 841 aa20.48■□□□□ 0.87
LETMD1-202ENST00000380135 F6X3S4 739 aa20.47■□□□□ 0.87
LETMD1-202ENST00000380135 PDE8AO60658 829 aa20.47■□□□□ 0.87
LETMD1-202ENST00000380135 MRPL50Q8N5N7 158 aaKnown RBP20.47■□□□□ 0.87
LETMD1-202ENST00000380135 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
LETMD1-202ENST00000380135 CDHR2Q9BYE9 1310 aa20.47■□□□□ 0.87
LETMD1-202ENST00000380135 ZC3H4Q9UPT8 1303 aaKnown RBP20.47■□□□□ 0.87
LETMD1-202ENST00000380135 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
LETMD1-202ENST00000380135 GRAPQ13588 217 aa20.46■□□□□ 0.87
LETMD1-202ENST00000380135 GCKRQ14397 625 aa20.46■□□□□ 0.87
LETMD1-202ENST00000380135 GRAPLQ8TC17 118 aaPredicted RBP20.46■□□□□ 0.87
LETMD1-202ENST00000380135 ATP6V0A2Q9Y487 856 aa20.46■□□□□ 0.87
LETMD1-202ENST00000380135 H7C1W4 665 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 354.3 ms