RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 AOX1Q06278 1338 aa21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 ANKRD36CQ5JPF3 1778 aa21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 C22orf23Q9BZE7 217 aa21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 CCDC87Q9NVE4 849 aa21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 NUP98P52948 1817 aa21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 ZNF831Q5JPB2 1677 aa21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 COPRSQ9NQ92 184 aa21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 COL5A3P25940 1745 aaPredicted RBP21.35■■□□□ 1.01
THUMPD2-201ENST00000378727 EIF5P55010 431 aaKnown RBP21.34■■□□□ 1.01
THUMPD2-201ENST00000378727 G3BP1Q13283 466 aaKnown RBP eCLIP21.34■■□□□ 1.01
THUMPD2-201ENST00000378727 LMBR1LQ6UX01 489 aa21.34■■□□□ 1.01
THUMPD2-201ENST00000378727 SIL1Q9H173 461 aa21.34■■□□□ 1.01
THUMPD2-201ENST00000378727 PTPN12Q05209 780 aaKnown RBP21.33■■□□□ 1.01
THUMPD2-201ENST00000378727 ONECUT3O60422 494 aaPredicted RBP21.33■■□□□ 1
THUMPD2-201ENST00000378727 FAM182BQ5T319 152 aa21.33■■□□□ 1
THUMPD2-201ENST00000378727 DZIP3Q86Y13 1208 aaKnown RBP21.33■■□□□ 1
THUMPD2-201ENST00000378727 CLASRPQ8N2M8 674 aaKnown RBP21.33■■□□□ 1
THUMPD2-201ENST00000378727 PI4K2BQ8TCG2 481 aa21.33■■□□□ 1
THUMPD2-201ENST00000378727 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1
THUMPD2-201ENST00000378727 NHSQ6T4R5 1651 aa21.32■■□□□ 1
THUMPD2-201ENST00000378727 BTAF1O14981 1849 aa21.32■■□□□ 1
THUMPD2-201ENST00000378727 TRPC5Q9UL62 973 aaPredicted RBP21.32■■□□□ 1
THUMPD2-201ENST00000378727 ERVV-1B6SEH8 477 aa21.32■■□□□ 1
THUMPD2-201ENST00000378727 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
THUMPD2-201ENST00000378727 PCCAP05165 728 aaPredicted RBP21.3■■□□□ 1
THUMPD2-201ENST00000378727 HSP90AB3PQ58FF7 597 aa21.3■■□□□ 1
THUMPD2-201ENST00000378727 GPTP24298 496 aa21.3■■□□□ 1
THUMPD2-201ENST00000378727 RBM25P49756 843 aaKnown RBP21.3■■□□□ 1
THUMPD2-201ENST00000378727 NLRP10Q86W26 655 aa21.3■■□□□ 1
THUMPD2-201ENST00000378727 FAM89AQ96GI7 184 aa21.29■■□□□ 1
THUMPD2-201ENST00000378727 SBF2Q86WG5 1849 aa21.29■■□□□ 1
THUMPD2-201ENST00000378727 ZBTB38Q8NAP3 1195 aaPredicted RBP21.28■■□□□ 1
THUMPD2-201ENST00000378727 EAF2Q96CJ1 260 aaPredicted RBP21.28■■□□□ 1
THUMPD2-201ENST00000378727 TTC41PQ6P2S7 1318 aa21.28■■□□□ 1
THUMPD2-201ENST00000378727 AACSQ86V21 672 aa21.28■■□□□ 1
THUMPD2-201ENST00000378727 LINC00116Q8NCU8 138 aa21.28■■□□□ 1
THUMPD2-201ENST00000378727 SLC4A3P48751 1232 aa21.27■■□□□ 1
THUMPD2-201ENST00000378727 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
THUMPD2-201ENST00000378727 CHMP3Q9Y3E7 222 aa21.27■■□□□ 1
THUMPD2-201ENST00000378727 TRIM6-TRIM34B2RNG4 842 aa21.27■□□□□ 0.99
THUMPD2-201ENST00000378727 IFIT2P09913 472 aaKnown RBP21.27■□□□□ 0.99
THUMPD2-201ENST00000378727 KCNQ4P56696 695 aa21.27■□□□□ 0.99
THUMPD2-201ENST00000378727 SYNE4Q8N205 404 aa21.27■□□□□ 0.99
THUMPD2-201ENST00000378727 PLA2G12BQ9BX93 195 aa21.27■□□□□ 0.99
THUMPD2-201ENST00000378727 AK9Q5TCS8 1911 aa21.26■□□□□ 0.99
THUMPD2-201ENST00000378727 CASC1Q6TDU7 716 aa21.26■□□□□ 0.99
THUMPD2-201ENST00000378727 ZNF34Q8IZ26 560 aa21.26■□□□□ 0.99
THUMPD2-201ENST00000378727 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
THUMPD2-201ENST00000378727 QTRT2Q9H974 415 aaKnown RBP21.26■□□□□ 0.99
THUMPD2-201ENST00000378727 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
THUMPD2-201ENST00000378727 CDHR2Q9BYE9 1310 aa21.25■□□□□ 0.99
THUMPD2-201ENST00000378727 CAMTA2O94983 1202 aa21.25■□□□□ 0.99
THUMPD2-201ENST00000378727 ECHDC1Q9NTX5 307 aa21.25■□□□□ 0.99
THUMPD2-201ENST00000378727 TLR7Q9NYK1 1049 aaKnown RBP21.25■□□□□ 0.99
THUMPD2-201ENST00000378727 TFCP2Q12800 502 aa21.24■□□□□ 0.99
THUMPD2-201ENST00000378727 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
THUMPD2-201ENST00000378727 GLRX3O76003 335 aaKnown RBP21.24■□□□□ 0.99
THUMPD2-201ENST00000378727 MAP4K4O95819 1239 aaPredicted RBP21.24■□□□□ 0.99
THUMPD2-201ENST00000378727 ATG9AQ7Z3C6 839 aa21.24■□□□□ 0.99
THUMPD2-201ENST00000378727 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
THUMPD2-201ENST00000378727 CHMLP26374 656 aa21.23■□□□□ 0.99
THUMPD2-201ENST00000378727 CSF1RP07333 972 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 ERICH6Q7L0X2 663 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 ZNF594Q96JF6 807 aaPredicted RBP21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 KIF2CQ99661 725 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 USP26Q9BXU7 913 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 LY75O60449 1722 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 ERC2O15083 957 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 GPATCH3Q96I76 525 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 BCORQ6W2J9 1755 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 MYH3P11055 1940 aa21.22■□□□□ 0.99
THUMPD2-201ENST00000378727 CNTNAP4Q9C0A0 1308 aa21.21■□□□□ 0.99
THUMPD2-201ENST00000378727 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
THUMPD2-201ENST00000378727 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
THUMPD2-201ENST00000378727 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
THUMPD2-201ENST00000378727 ESYT1Q9BSJ8 1104 aa21.2■□□□□ 0.98
THUMPD2-201ENST00000378727 EYA2O00167 538 aa21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 IRS4O14654 1257 aaPredicted RBP21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 LRRC24Q50LG9 513 aa21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 DAXXQ9UER7 740 aaPredicted RBP21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 BRWD3Q6RI45 1802 aa21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 SUSD4Q5VX71 490 aa21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 CNTROBQ8N137 903 aa21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 CCDC85AQ96PX6 553 aaPredicted RBP21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
THUMPD2-201ENST00000378727 TAF1LQ8IZX4 1826 aa21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 CIAO1O76071 339 aa21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 REC8O95072 547 aa21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 IL15P40933 162 aaPredicted RBP21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 TTLL11Q8NHH1 800 aa21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 TBC1D2Q9BYX2 928 aa21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 PUS3Q9BZE2 481 aaKnown RBP21.18■□□□□ 0.98
THUMPD2-201ENST00000378727 CCNL1Q9UK58 526 aaPredicted RBP21.17■□□□□ 0.98
THUMPD2-201ENST00000378727 CTSWP56202 376 aa21.17■□□□□ 0.98
THUMPD2-201ENST00000378727 BECN1Q14457 450 aa21.17■□□□□ 0.98
THUMPD2-201ENST00000378727 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
THUMPD2-201ENST00000378727 IL25Q9H293 177 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms