RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 RSPH14Q9UHP6 348 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 USP27XA6NNY8 438 aa14.27□□□□□ -0.12
SF1-204ENST00000377390 NR1I2O75469 434 aa14.27□□□□□ -0.12
SF1-204ENST00000377390 HNRNPH2P55795 449 aaKnown RBP14.27□□□□□ -0.12
SF1-204ENST00000377390 PTH1RQ03431 593 aa14.27□□□□□ -0.12
SF1-204ENST00000377390 CCDC73Q6ZRK6 1079 aa14.27□□□□□ -0.12
SF1-204ENST00000377390 ANKRD7Q92527 254 aa14.27□□□□□ -0.12
SF1-204ENST00000377390 DDX41Q9UJV9 622 aaKnown RBP14.27□□□□□ -0.12
SF1-204ENST00000377390 TCHHQ07283 1943 aa14.27□□□□□ -0.13
SF1-204ENST00000377390 CCDC69A6NI79 296 aa14.27□□□□□ -0.13
SF1-204ENST00000377390 PIP4K2BP78356 416 aa14.27□□□□□ -0.13
SF1-204ENST00000377390 ERCC6LQ2NKX8 1250 aa14.27□□□□□ -0.13
SF1-204ENST00000377390 LARP1Q6PKG0 1096 aaKnown RBP14.27□□□□□ -0.13
SF1-204ENST00000377390 ZNF397Q8NF99 534 aaPredicted RBP14.27□□□□□ -0.13
SF1-204ENST00000377390 FSD1Q9BTV5 496 aa14.27□□□□□ -0.13
SF1-204ENST00000377390 OSBPL3Q9H4L5 887 aa14.27□□□□□ -0.13
SF1-204ENST00000377390 RGS12O14924 1447 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 KIF1BO60333 1816 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 BIN1O00499 593 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 KINO60870 393 aaKnown RBP14.26□□□□□ -0.13
SF1-204ENST00000377390 TEX35Q5T0J7 233 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 GPATCH3Q96I76 525 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
SF1-204ENST00000377390 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
SF1-204ENST00000377390 ME1P48163 572 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 CCDC144BQ3MJ40 725 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
SF1-204ENST00000377390 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 SHPRHQ149N8 1683 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 MLH3Q9UHC1 1453 aa14.26□□□□□ -0.13
SF1-204ENST00000377390 EVA1CP58658 441 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
SF1-204ENST00000377390 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 HECW2Q9P2P5 1572 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 SYT10Q6XYQ8 523 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
SF1-204ENST00000377390 RAD50Q92878 1312 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 KMT5BQ4FZB7 885 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 AACSQ86V21 672 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
SF1-204ENST00000377390 PA2G4Q9UQ80 394 aaKnown RBP14.25□□□□□ -0.13
SF1-204ENST00000377390 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 MED14O60244 1454 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 FBXO38Q6PIJ6 1188 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 UBXN4Q92575 508 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
SF1-204ENST00000377390 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
SF1-204ENST00000377390 URI1O94763 535 aaPredicted RBP14.24□□□□□ -0.13
SF1-204ENST00000377390 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
SF1-204ENST00000377390 HYPKQ9NX55 129 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 RPAP1Q9BWH6 1393 aaPredicted RBP14.24□□□□□ -0.13
SF1-204ENST00000377390 ATP5J2-PTCD1G3V325 749 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 SLU7O95391 586 aaKnown RBP14.24□□□□□ -0.13
SF1-204ENST00000377390 RAPGEF4Q8WZA2 1011 aa14.24□□□□□ -0.13
SF1-204ENST00000377390 MROH2AA6NES4 1674 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 BTBD11A6QL63 1104 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 ADAMTS2O95450 1211 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 SNW1Q13573 536 aaKnown RBP14.23□□□□□ -0.13
SF1-204ENST00000377390 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 ARHGAP29Q52LW3 1261 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 RNF20Q5VTR2 975 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 KRT28Q7Z3Y7 464 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 KLHDC4Q8TBB5 520 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
SF1-204ENST00000377390 JAK2O60674 1132 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 GLRX3O76003 335 aaKnown RBP14.23□□□□□ -0.13
SF1-204ENST00000377390 PSMA5P28066 241 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 KRBA2Q6ZNG9 492 aa14.23□□□□□ -0.13
SF1-204ENST00000377390 TET3O43151 1660 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 FAM135BQ49AJ0 1406 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 TMC6Q7Z403 805 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 LEO1Q8WVC0 666 aaPredicted RBP14.22□□□□□ -0.13
SF1-204ENST00000377390 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 NDUFB9Q9Y6M9 179 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 CAPN2P17655 700 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 CCDC34Q96HJ3 373 aa14.22□□□□□ -0.13
SF1-204ENST00000377390 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.13
SF1-204ENST00000377390 BMS1Q14692 1282 aaKnown RBP14.21□□□□□ -0.13
SF1-204ENST00000377390 TMCO3Q6UWJ1 677 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 TOM1L2Q6ZVM7 507 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 LRRC8AQ8IWT6 810 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 TMEM87AQ8NBN3 555 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 LSG1Q9H089 658 aaKnown RBP14.21□□□□□ -0.13
SF1-204ENST00000377390 USP44Q9H0E7 712 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 ZSWIM4Q9H7M6 989 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 DNAI1Q9UI46 699 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 CWF19L2Q2TBE0 894 aaKnown RBP14.21□□□□□ -0.13
SF1-204ENST00000377390 CCAR1Q8IX12 1150 aaKnown RBP14.21□□□□□ -0.13
SF1-204ENST00000377390 BRF1Q92994 677 aa14.21□□□□□ -0.13
SF1-204ENST00000377390 ARGLU1Q9NWB6 273 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms