RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ORC3Q9UBD5 711 aaPredicted RBP19.57■□□□□ 0.72
VARS-215ENST00000375663 GRM8O00222 908 aa19.57■□□□□ 0.72
VARS-215ENST00000375663 TDO2P48775 406 aa19.57■□□□□ 0.72
VARS-215ENST00000375663 CREB3L3Q68CJ9 461 aa19.57■□□□□ 0.72
VARS-215ENST00000375663 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
VARS-215ENST00000375663 PNMA6EA0A0J9YXQ4 647 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 ATP5J2-PTCD1G3V325 749 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 TERF1P54274 439 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 TAF3Q5VWG9 929 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 LUZP1Q86V48 1076 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 CFAP65Q6ZU64 1925 aaKnown RBP19.56■□□□□ 0.72
VARS-215ENST00000375663 CCDC94Q9BW85 323 aaPredicted RBP19.56■□□□□ 0.72
VARS-215ENST00000375663 ZNHIT6Q9NWK9 470 aaKnown RBP19.56■□□□□ 0.72
VARS-215ENST00000375663 CCDC171Q6TFL3 1326 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 WASF1Q92558 559 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 AIDAQ96BJ3 306 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
VARS-215ENST00000375663 UBAC1Q9BSL1 405 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 AKAP2Q9Y2D5 859 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 FLT4P35916 1363 aa19.56■□□□□ 0.72
VARS-215ENST00000375663 ATP7AQ04656 1500 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 G3V3G9 751 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 SKIDA1Q1XH10 827 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 AXDND1Q5T1B0 1012 aaPredicted RBP19.55■□□□□ 0.72
VARS-215ENST00000375663 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 ZNF213O14771 459 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 RAD21O60216 631 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 METTL24Q5JXM2 366 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 ISM2Q6H9L7 571 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 KSR2Q6VAB6 950 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 STRN4Q9NRL3 753 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 EPB41L2O43491 1005 aaKnown RBP19.55■□□□□ 0.72
VARS-215ENST00000375663 HAND2P61296 217 aa19.55■□□□□ 0.72
VARS-215ENST00000375663 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
VARS-215ENST00000375663 TMX4Q9H1E5 349 aaPredicted RBP19.54■□□□□ 0.72
VARS-215ENST00000375663 SNRKQ9NRH2 765 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 SGSM2O43147 1006 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 KLHL10Q6JEL2 608 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 Q6ZUG5 572 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 RUFY3Q7L099 469 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 CHAMP1Q96JM3 812 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 MPHOSPH8Q99549 860 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 CNNM3Q8NE01 707 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 SNX14Q9Y5W7 946 aa19.54■□□□□ 0.72
VARS-215ENST00000375663 C17orf53Q8N3J3 647 aaPredicted RBP19.53■□□□□ 0.72
VARS-215ENST00000375663 PIBF1Q8WXW3 757 aa19.53■□□□□ 0.72
VARS-215ENST00000375663 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
VARS-215ENST00000375663 CCDC82Q8N4S0 544 aa19.53■□□□□ 0.72
VARS-215ENST00000375663 POLR3GO15318 223 aaPredicted RBP19.52■□□□□ 0.72
VARS-215ENST00000375663 DTNBO60941 627 aa19.52■□□□□ 0.72
VARS-215ENST00000375663 FAM173BQ6P4H8 233 aa19.52■□□□□ 0.72
VARS-215ENST00000375663 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
VARS-215ENST00000375663 CWF19L2Q2TBE0 894 aaKnown RBP19.52■□□□□ 0.72
VARS-215ENST00000375663 ANKRD13DQ6ZTN6 518 aa19.52■□□□□ 0.71
VARS-215ENST00000375663 STIM1Q13586 685 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 CCDC150Q8NCX0 1101 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 CCDC102AQ96A19 550 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 RAD50Q92878 1312 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 GPT2Q8TD30 523 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 PRDM11Q9NQV5 511 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.51■□□□□ 0.716e-8■■□□□ 11.5
VARS-215ENST00000375663 V9GYY5 206 aaPredicted RBP19.51■□□□□ 0.71
VARS-215ENST00000375663 RTL1A6NKG5 1358 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
VARS-215ENST00000375663 KIF24Q5T7B8 1368 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 AOPEPQ8N6M6 819 aa19.51■□□□□ 0.71
VARS-215ENST00000375663 MRPS27Q92552 414 aaKnown RBP19.51■□□□□ 0.71
VARS-215ENST00000375663 CASQ1P31415 396 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 KRT222Q8N1A0 295 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 SAMD9LQ8IVG5 1584 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 KIF4BQ2VIQ3 1234 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 MCMDC2Q4G0Z9 681 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 ZNF500O60304 480 aaPredicted RBP19.5■□□□□ 0.71
VARS-215ENST00000375663 BMS1Q14692 1282 aaKnown RBP19.5■□□□□ 0.71
VARS-215ENST00000375663 PALD1Q9ULE6 856 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 CEP131Q9UPN4 1083 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 COPS6Q7L5N1 327 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 XAGE3Q8WTP9 111 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 NAPBQ9H115 298 aa19.5■□□□□ 0.71
VARS-215ENST00000375663 H0YHG0 523 aa19.49■□□□□ 0.71
VARS-215ENST00000375663 HSPA4P34932 840 aa19.49■□□□□ 0.71
VARS-215ENST00000375663 MYRIPQ8NFW9 859 aa19.49■□□□□ 0.71
VARS-215ENST00000375663 GNL3LQ9NVN8 582 aaKnown RBP19.49■□□□□ 0.71
VARS-215ENST00000375663 LRP2BPQ9P2M1 347 aa19.49■□□□□ 0.71
VARS-215ENST00000375663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.48■□□□□ 0.711e-6■■□□□ 12.1
VARS-215ENST00000375663 KIF5CO60282 957 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 IFIT5Q13325 482 aaKnown RBP19.48■□□□□ 0.71
VARS-215ENST00000375663 TMX1Q9H3N1 280 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 ZBTB3Q9H5J0 574 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 AOX1Q06278 1338 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 KLF18A0A0U1RQI7 1052 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 CPLX3Q8WVH0 158 aa19.48■□□□□ 0.71
VARS-215ENST00000375663 MICU3Q86XE3 530 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 CALCOCO1Q9P1Z2 691 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 TTC37Q6PGP7 1564 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 KCNG4Q8TDN1 519 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 ABCA8O94911 1581 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms