RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 ISCA1Q9BUE6 129 aa23.78■■□□□ 1.4
NECAB3-202ENST00000375238 COL5A3P25940 1745 aaPredicted RBP23.77■■□□□ 1.4
NECAB3-202ENST00000375238 EPHA10Q5JZY3 1008 aa23.77■■□□□ 1.4
NECAB3-202ENST00000375238 SBF2Q86WG5 1849 aa23.77■■□□□ 1.4
NECAB3-202ENST00000375238 H7C1W4 665 aa23.76■■□□□ 1.39
NECAB3-202ENST00000375238 CASP7P55210 303 aa23.76■■□□□ 1.39
NECAB3-202ENST00000375238 GIGYF2Q6Y7W6 1299 aaKnown RBP23.76■■□□□ 1.39
NECAB3-202ENST00000375238 DZIP3Q86Y13 1208 aaKnown RBP23.76■■□□□ 1.39
NECAB3-202ENST00000375238 COL15A1P39059 1388 aa23.76■■□□□ 1.39
NECAB3-202ENST00000375238 MYH14Q7Z406 1995 aaKnown RBP23.76■■□□□ 1.39
NECAB3-202ENST00000375238 OS9Q13438 667 aaPredicted RBP23.76■■□□□ 1.39
NECAB3-202ENST00000375238 ANKRD36CQ5JPF3 1778 aa23.75■■□□□ 1.39
NECAB3-202ENST00000375238 TBC1D2BQ9UPU7 963 aa23.75■■□□□ 1.39
NECAB3-202ENST00000375238 NUP98P52948 1817 aa23.75■■□□□ 1.39
NECAB3-202ENST00000375238 EIF5P55010 431 aaKnown RBP23.74■■□□□ 1.39
NECAB3-202ENST00000375238 HLFQ16534 295 aa23.74■■□□□ 1.39
NECAB3-202ENST00000375238 RHPN1Q8TCX5 695 aa23.74■■□□□ 1.39
NECAB3-202ENST00000375238 KIF1BPQ96EK5 621 aa23.74■■□□□ 1.39
NECAB3-202ENST00000375238 IL1RAPL2Q9NP60 686 aa23.74■■□□□ 1.39
NECAB3-202ENST00000375238 PA2G4Q9UQ80 394 aaKnown RBP23.74■■□□□ 1.39
NECAB3-202ENST00000375238 HSP90AB3PQ58FF7 597 aa23.74■■□□□ 1.39
NECAB3-202ENST00000375238 CHMP5Q9NZZ3 219 aa23.74■■□□□ 1.39
NECAB3-202ENST00000375238 TRIM28Q13263 835 aaKnown RBP23.73■■□□□ 1.39
NECAB3-202ENST00000375238 SDSP20132 328 aa23.72■■□□□ 1.39
NECAB3-202ENST00000375238 DDIT3P35638 169 aa23.72■■□□□ 1.39
NECAB3-202ENST00000375238 ERVV-1B6SEH8 477 aa23.72■■□□□ 1.39
NECAB3-202ENST00000375238 RABL6Q3YEC7 729 aaPredicted RBP23.72■■□□□ 1.39
NECAB3-202ENST00000375238 BRWD3Q6RI45 1802 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 EIF5BO60841 1220 aaKnown RBP23.71■■□□□ 1.39
NECAB3-202ENST00000375238 LINC00116Q8NCU8 138 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 OSBPL3Q9H4L5 887 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 GPTP24298 496 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 PDE1AP54750 535 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 KCNQ4P56696 695 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
NECAB3-202ENST00000375238 MX1P20591 662 aa23.7■■□□□ 1.38
NECAB3-202ENST00000375238 FOXO4P98177 505 aa23.69■■□□□ 1.38
NECAB3-202ENST00000375238 G3BP1Q13283 466 aaKnown RBP eCLIP23.69■■□□□ 1.38
NECAB3-202ENST00000375238 LMBR1LQ6UX01 489 aa23.69■■□□□ 1.38
NECAB3-202ENST00000375238 SALL3Q9BXA9 1300 aa23.69■■□□□ 1.38
NECAB3-202ENST00000375238 CD2BP2O95400 341 aaKnown RBP23.69■■□□□ 1.38
NECAB3-202ENST00000375238 ZNF772Q68DY9 489 aaPredicted RBP23.69■■□□□ 1.38
NECAB3-202ENST00000375238 SIL1Q9H173 461 aa23.69■■□□□ 1.38
NECAB3-202ENST00000375238 PCCAP05165 728 aaPredicted RBP23.68■■□□□ 1.38
NECAB3-202ENST00000375238 NLRP10Q86W26 655 aa23.68■■□□□ 1.38
NECAB3-202ENST00000375238 KLHDC4Q8TBB5 520 aa23.68■■□□□ 1.38
NECAB3-202ENST00000375238 USP26Q9BXU7 913 aa23.68■■□□□ 1.38
NECAB3-202ENST00000375238 CHMP3Q9Y3E7 222 aa23.68■■□□□ 1.38
NECAB3-202ENST00000375238 LY75O60449 1722 aa23.67■■□□□ 1.38
NECAB3-202ENST00000375238 NUTM1Q86Y26 1132 aa23.67■■□□□ 1.38
NECAB3-202ENST00000375238 KRT27Q7Z3Y8 459 aa23.67■■□□□ 1.38
NECAB3-202ENST00000375238 ZBTB38Q8NAP3 1195 aaPredicted RBP23.67■■□□□ 1.38
NECAB3-202ENST00000375238 CCNL1Q9UK58 526 aaPredicted RBP23.67■■□□□ 1.38
NECAB3-202ENST00000375238 RFX5P48382 616 aaPredicted RBP23.66■■□□□ 1.38
NECAB3-202ENST00000375238 TSHZ3Q63HK5 1081 aa23.66■■□□□ 1.38
NECAB3-202ENST00000375238 FAM89AQ96GI7 184 aa23.66■■□□□ 1.38
NECAB3-202ENST00000375238 CNTNAP4Q9C0A0 1308 aa23.66■■□□□ 1.38
NECAB3-202ENST00000375238 CLASRPQ8N2M8 674 aaKnown RBP23.65■■□□□ 1.38
NECAB3-202ENST00000375238 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
NECAB3-202ENST00000375238 MCM4P33991 863 aa23.65■■□□□ 1.38
NECAB3-202ENST00000375238 TUBGCP6Q96RT7 1819 aa23.65■■□□□ 1.38
NECAB3-202ENST00000375238 BCL11BQ9C0K0 894 aaPredicted RBP23.65■■□□□ 1.38
NECAB3-202ENST00000375238 STAP2Q9UGK3 403 aa23.65■■□□□ 1.38
NECAB3-202ENST00000375238 CAMTA2O94983 1202 aa23.64■■□□□ 1.37
NECAB3-202ENST00000375238 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
NECAB3-202ENST00000375238 PTPN12Q05209 780 aaKnown RBP23.64■■□□□ 1.37
NECAB3-202ENST00000375238 FAM196AQ6ZSG2 479 aa23.64■■□□□ 1.37
NECAB3-202ENST00000375238 ZNF34Q8IZ26 560 aa23.64■■□□□ 1.37
NECAB3-202ENST00000375238 SASH1O94885 1247 aa23.63■■□□□ 1.37
NECAB3-202ENST00000375238 TAF1LQ8IZX4 1826 aa23.62■■□□□ 1.37
NECAB3-202ENST00000375238 BCORQ6W2J9 1755 aa23.62■■□□□ 1.37
NECAB3-202ENST00000375238 AOX1Q06278 1338 aa23.62■■□□□ 1.37
NECAB3-202ENST00000375238 CDHR2Q9BYE9 1310 aa23.62■■□□□ 1.37
NECAB3-202ENST00000375238 K7ELQ4 463 aaPredicted RBP23.62■■□□□ 1.37
NECAB3-202ENST00000375238 TRMT112Q9UI30 125 aaKnown RBP23.62■■□□□ 1.37
NECAB3-202ENST00000375238 UBN2Q6ZU65 1347 aa23.61■■□□□ 1.37
NECAB3-202ENST00000375238 RC3H1Q5TC82 1133 aaKnown RBP23.61■■□□□ 1.37
NECAB3-202ENST00000375238 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
NECAB3-202ENST00000375238 PLA2G12BQ9BX93 195 aa23.61■■□□□ 1.37
NECAB3-202ENST00000375238 CIZ1Q9ULV3 898 aaPredicted RBP23.61■■□□□ 1.37
NECAB3-202ENST00000375238 RABEP1Q15276 862 aa23.6■■□□□ 1.37
NECAB3-202ENST00000375238 SYNE4Q8N205 404 aa23.6■■□□□ 1.37
NECAB3-202ENST00000375238 IFIT2P09913 472 aaKnown RBP23.59■■□□□ 1.37
NECAB3-202ENST00000375238 AACSQ86V21 672 aa23.59■■□□□ 1.37
NECAB3-202ENST00000375238 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
NECAB3-202ENST00000375238 MYH3P11055 1940 aa23.58■■□□□ 1.37
NECAB3-202ENST00000375238 GNPATO15228 680 aa23.58■■□□□ 1.37
NECAB3-202ENST00000375238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.58■■□□□ 1.37
NECAB3-202ENST00000375238 IRS4O14654 1257 aaPredicted RBP23.57■■□□□ 1.36
NECAB3-202ENST00000375238 RPS6KA4O75676 772 aa23.57■■□□□ 1.36
NECAB3-202ENST00000375238 ERC2O15083 957 aa23.57■■□□□ 1.36
NECAB3-202ENST00000375238 TRIM37O94972 964 aa23.57■■□□□ 1.36
NECAB3-202ENST00000375238 PARP10Q53GL7 1025 aa23.57■■□□□ 1.36
NECAB3-202ENST00000375238 SUSD4Q5VX71 490 aa23.57■■□□□ 1.36
NECAB3-202ENST00000375238 NIP7Q9Y221 180 aaKnown RBP eCLIP23.57■■□□□ 1.36
NECAB3-202ENST00000375238 FAM177BA6PVY3 158 aa23.56■■□□□ 1.36
NECAB3-202ENST00000375238 TRIM6-TRIM34B2RNG4 842 aa23.56■■□□□ 1.36
NECAB3-202ENST00000375238 REC8O95072 547 aa23.56■■□□□ 1.36
NECAB3-202ENST00000375238 CCDC57Q2TAC2 916 aa23.56■■□□□ 1.36
NECAB3-202ENST00000375238 EAF2Q96CJ1 260 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms