RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 BRIP1Q9BX63 1249 aa14.43□□□□□ -0.1
HSPG2-202ENST00000374676 CWC25Q9NXE8 425 aaPredicted RBP14.43□□□□□ -0.1
HSPG2-202ENST00000374676 TRMT112Q9UI30 125 aaKnown RBP14.43□□□□□ -0.1
HSPG2-202ENST00000374676 FAM177BA6PVY3 158 aa14.42□□□□□ -0.1
HSPG2-202ENST00000374676 ALDH1L1O75891 902 aa14.42□□□□□ -0.1
HSPG2-202ENST00000374676 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
HSPG2-202ENST00000374676 ST5P78524 1137 aa14.42□□□□□ -0.1
HSPG2-202ENST00000374676 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
HSPG2-202ENST00000374676 ATF7IPQ6VMQ6 1270 aa14.42□□□□□ -0.1
HSPG2-202ENST00000374676 SRCIN1Q9C0H9 1055 aa14.42□□□□□ -0.1
HSPG2-202ENST00000374676 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 NPHP1O15259 732 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 PCCAP05165 728 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-202ENST00000374676 TGFB2P61812 414 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 GCKRQ14397 625 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 CWF19L2Q2TBE0 894 aaKnown RBP14.41□□□□□ -0.1
HSPG2-202ENST00000374676 SLC4A10Q6U841 1118 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 ZBTB38Q8NAP3 1195 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-202ENST00000374676 FRAT1Q92837 279 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-202ENST00000374676 SYT17Q9BSW7 474 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-202ENST00000374676 PDZRN3Q9UPQ7 1066 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 PXDNLA1KZ92 1463 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 ANKRD31Q8N7Z5 1873 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
HSPG2-202ENST00000374676 KLRG2A4D1S0 409 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-202ENST00000374676 H7C1W4 665 aa14.4□□□□□ -0.1
HSPG2-202ENST00000374676 PDE6BP35913 854 aa14.4□□□□□ -0.1
HSPG2-202ENST00000374676 ERFEQ4G0M1 354 aa14.4□□□□□ -0.1
HSPG2-202ENST00000374676 NUTM1Q86Y26 1132 aa14.4□□□□□ -0.1
HSPG2-202ENST00000374676 N4BP2Q86UW6 1770 aaPredicted RBP14.39□□□□□ -0.11
HSPG2-202ENST00000374676 TRIM27P14373 513 aa14.39□□□□□ -0.11
HSPG2-202ENST00000374676 CCT4P50991 539 aaKnown RBP14.39□□□□□ -0.11
HSPG2-202ENST00000374676 CCDC24Q8N4L8 307 aa14.39□□□□□ -0.11
HSPG2-202ENST00000374676 FAM89AQ96GI7 184 aa14.39□□□□□ -0.11
HSPG2-202ENST00000374676 ABCC4O15439 1325 aa14.39□□□□□ -0.11
HSPG2-202ENST00000374676 CDHR2Q9BYE9 1310 aa14.39□□□□□ -0.11
HSPG2-202ENST00000374676 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
HSPG2-202ENST00000374676 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
HSPG2-202ENST00000374676 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
HSPG2-202ENST00000374676 ABCC12Q96J65 1359 aa14.37□□□□□ -0.11
HSPG2-202ENST00000374676 MS4A1P11836 297 aa14.37□□□□□ -0.11
HSPG2-202ENST00000374676 SYNE4Q8N205 404 aa14.37□□□□□ -0.11
HSPG2-202ENST00000374676 NLRP3Q96P20 1036 aa14.37□□□□□ -0.11
HSPG2-202ENST00000374676 KIAA1551Q9HCM1 1747 aa14.37□□□□□ -0.11
HSPG2-202ENST00000374676 DDX60Q8IY21 1712 aaKnown RBP14.36□□□□□ -0.11
HSPG2-202ENST00000374676 H0YIN7 160 aa14.36□□□□□ -0.11
HSPG2-202ENST00000374676 IRS4O14654 1257 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-202ENST00000374676 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-202ENST00000374676 CASP7P55210 303 aa14.36□□□□□ -0.11
HSPG2-202ENST00000374676 C2CD5Q86YS7 1000 aa14.36□□□□□ -0.11
HSPG2-202ENST00000374676 DZIP1LQ8IYY4 767 aaKnown RBP14.36□□□□□ -0.11
HSPG2-202ENST00000374676 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-202ENST00000374676 NLGN2Q8NFZ4 835 aa14.36□□□□□ -0.11
HSPG2-202ENST00000374676 C9orf78Q9NZ63 289 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-202ENST00000374676 TNNQ9UQP3 1299 aa14.36□□□□□ -0.11
HSPG2-202ENST00000374676 UTYO14607 1347 aa14.36□□□□□ -0.11
HSPG2-202ENST00000374676 LAMB2P55268 1798 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 A0A0G2JLW4 131 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 GRM8O00222 908 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 SRGNP10124 158 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 DPEP1P16444 411 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 KCNA3P22001 575 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 CRY2Q49AN0 593 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
HSPG2-202ENST00000374676 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 JARID2Q92833 1246 aaPredicted RBP14.35□□□□□ -0.11
HSPG2-202ENST00000374676 CLUAP1Q96AJ1 413 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 PLA2G12BQ9BX93 195 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 MYH3P11055 1940 aa14.35□□□□□ -0.11
HSPG2-202ENST00000374676 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
HSPG2-202ENST00000374676 BRCA1P38398 1863 aaKnown RBP14.34□□□□□ -0.11
HSPG2-202ENST00000374676 TNRC6CQ9HCJ0 1690 aaKnown RBP14.34□□□□□ -0.11
HSPG2-202ENST00000374676 PDE8AO60658 829 aa14.34□□□□□ -0.11
HSPG2-202ENST00000374676 NPR1P16066 1061 aa14.34□□□□□ -0.11
HSPG2-202ENST00000374676 CHRNA5P30532 468 aa14.34□□□□□ -0.11
HSPG2-202ENST00000374676 HOXA10P31260 410 aaPredicted RBP14.34□□□□□ -0.11
HSPG2-202ENST00000374676 SF3B3Q15393 1217 aaKnown RBP14.34□□□□□ -0.11
HSPG2-202ENST00000374676 STYK1Q6J9G0 422 aa14.34□□□□□ -0.11
HSPG2-202ENST00000374676 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
HSPG2-202ENST00000374676 MASTLQ96GX5 879 aa14.34□□□□□ -0.11
HSPG2-202ENST00000374676 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
HSPG2-202ENST00000374676 C3orf67Q6ZVT6 689 aa14.33□□□□□ -0.12
HSPG2-202ENST00000374676 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
HSPG2-202ENST00000374676 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
HSPG2-202ENST00000374676 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-202ENST00000374676 PLIN1O60240 522 aa14.32□□□□□ -0.12
HSPG2-202ENST00000374676 NBPF7P0C2Y1 421 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-202ENST00000374676 RLBP1P12271 317 aa14.32□□□□□ -0.12
HSPG2-202ENST00000374676 CNKSR1Q969H4 720 aa14.32□□□□□ -0.12
HSPG2-202ENST00000374676 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
HSPG2-202ENST00000374676 CSF1RP07333 972 aa14.31□□□□□ -0.12
HSPG2-202ENST00000374676 ALDH1B1P30837 517 aa14.31□□□□□ -0.12
HSPG2-202ENST00000374676 TTLL6Q8N841 843 aa14.31□□□□□ -0.12
HSPG2-202ENST00000374676 RPGRQ92834 1020 aaKnown RBP14.31□□□□□ -0.12
HSPG2-202ENST00000374676 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.12
HSPG2-202ENST00000374676 RBM17Q96I25 401 aaKnown RBP14.31□□□□□ -0.12
HSPG2-202ENST00000374676 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
HSPG2-202ENST00000374676 GNAI3P08754 354 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms