RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 METAP2P50579 478 aaKnown RBP eCLIP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 ESR2Q92731 530 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 CALRP27797 417 aaKnown RBP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 MCM5P33992 734 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 RMND1Q9NWS8 449 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 RPRD2Q5VT52 1461 aaKnown RBP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 FAM177A1Q8N128 213 aaPredicted RBP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 GTPBP4Q9BZE4 634 aaKnown RBP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 CRACR2AQ9BSW2 395 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 TBCAO75347 108 aaKnown RBP12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 CCDC97Q96F63 343 aaPredicted RBP12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 CENPHQ9H3R5 247 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 CHMP4BP1P59074 171 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 CCDC40Q4G0X9 1142 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 EYA3Q99504 573 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 TRIM27P14373 513 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 ATP2B3Q16720 1220 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 GOLGA6L9A6NEM1 432 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 PLCH2O75038 1416 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 GSDMDP57764 484 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 ALS2CR12Q96Q35 445 aa12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
PHACTR4-202ENST00000373839 MTIF2P46199 727 aaKnown RBP12.77□□□□□ -0.36
PHACTR4-202ENST00000373839 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.36
PHACTR4-202ENST00000373839 MBIPQ9NS73 344 aa12.77□□□□□ -0.36
PHACTR4-202ENST00000373839 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.36
PHACTR4-202ENST00000373839 TPTE2Q6XPS3 522 aa12.77□□□□□ -0.36
PHACTR4-202ENST00000373839 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 USP8P40818 1118 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 LUZP1Q86V48 1076 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 DDX12PQ92771 950 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 ZNF518AQ6AHZ1 1483 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 GNAT2P19087 354 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 WTAPQ15007 396 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 WDR97A6NE52 1622 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 IL2RBP14784 551 aa12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 TDRD12Q587J7 1177 aaKnown RBP12.77□□□□□ -0.37
PHACTR4-202ENST00000373839 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 DUOX2Q9NRD8 1548 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 IDEP14735 1019 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 UTP14AQ9BVJ6 771 aaKnown RBP12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 A2MP01023 1474 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 GCOM1H8Y6P7 765 aaPredicted RBP12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 MYZAPP0CAP1 466 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 GSTTP1A0A1W2PQM5 241 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 CALM1P0DP23 149 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 CALM2P0DP24 149 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 CALM3P0DP25 149 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 CTNNA2P26232 953 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 CCDC102BQ68D86 513 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
PHACTR4-202ENST00000373839 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 RHPN1Q8TCX5 695 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 RIMS2Q9UQ26 1411 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 STAMBPO95630 424 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 NUP88Q99567 741 aaPredicted RBP12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 FLT4P35916 1363 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 STX6O43752 255 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 STX1AQ16623 288 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 KIF18AQ8NI77 898 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 KIF4AO95239 1232 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 RBM25P49756 843 aaKnown RBP12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 EHBP1Q8NDI1 1231 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 JDP2Q8WYK2 163 aa12.75□□□□□ -0.37
PHACTR4-202ENST00000373839 SPAG1Q07617 926 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 NAA16Q6N069 864 aaPredicted RBP12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 CYP7A1P22680 504 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms