RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
PGK1-201ENST00000373316 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 F6X3S4 739 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 VAMP4O75379 141 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 IP6K1Q92551 441 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 GSDMDP57764 484 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 DNAAF4Q8WXU2 420 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 GOLGA6L9A6NEM1 432 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 CCDC69A6NI79 296 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 ARHGEF25Q86VW2 580 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 TCEAL9Q9UHQ7 104 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 UTRNP46939 3433 aa12.44□□□□□ -0.42
PGK1-201ENST00000373316 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
PGK1-201ENST00000373316 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
PGK1-201ENST00000373316 GTPBP4Q9BZE4 634 aaKnown RBP12.43□□□□□ -0.42
PGK1-201ENST00000373316 RAD50Q92878 1312 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 G2E3Q7L622 706 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
PGK1-201ENST00000373316 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
PGK1-201ENST00000373316 ZSCAN16Q9H4T2 348 aaPredicted RBP12.43□□□□□ -0.42
PGK1-201ENST00000373316 FIBPO43427 364 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
PGK1-201ENST00000373316 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
PGK1-201ENST00000373316 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 RGPD2P0DJD1 1756 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 STRCQ7RTU9 1775 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 ZSCAN12O43309 604 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 TTC41PQ6P2S7 1318 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 KIAA0232Q92628 1395 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 STARD3NLO95772 234 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 CNNM1Q9NRU3 951 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
PGK1-201ENST00000373316 SLC39A6Q13433 755 aa12.42□□□□□ -0.42
PGK1-201ENST00000373316 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 TUBB4BP68371 445 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
PGK1-201ENST00000373316 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 CTDP1Q9Y5B0 961 aaPredicted RBP12.41□□□□□ -0.42
PGK1-201ENST00000373316 HOXB7P09629 217 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
PGK1-201ENST00000373316 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 RTL1A6NKG5 1358 aa12.41□□□□□ -0.42
PGK1-201ENST00000373316 ATL3Q6DD88 541 aa12.4□□□□□ -0.42
PGK1-201ENST00000373316 CCAR2Q8N163 923 aaKnown RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
PGK1-201ENST00000373316 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
PGK1-201ENST00000373316 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
PGK1-201ENST00000373316 PRDM11Q9NQV5 511 aa12.4□□□□□ -0.42
PGK1-201ENST00000373316 UBE2HP62256 183 aa12.4□□□□□ -0.42
PGK1-201ENST00000373316 FLIIQ13045 1269 aa12.4□□□□□ -0.42
PGK1-201ENST00000373316 BMP15O95972 392 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 ME1P48163 572 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
PGK1-201ENST00000373316 LTN1O94822 1766 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 EPS15P42566 896 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
PGK1-201ENST00000373316 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
PGK1-201ENST00000373316 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
PGK1-201ENST00000373316 ZNF853P0CG23 659 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
PGK1-201ENST00000373316 NPHP3Q7Z494 1330 aa12.38□□□□□ -0.43
PGK1-201ENST00000373316 MSH5O43196 834 aa12.38□□□□□ -0.43
PGK1-201ENST00000373316 ERLIN2O94905 339 aa12.38□□□□□ -0.43
PGK1-201ENST00000373316 SERPINC1P01008 464 aa12.38□□□□□ -0.43
PGK1-201ENST00000373316 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
PGK1-201ENST00000373316 VPS53Q5VIR6 699 aa12.38□□□□□ -0.43
PGK1-201ENST00000373316 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
PGK1-201ENST00000373316 TSPYL1Q9H0U9 437 aa12.38□□□□□ -0.43
PGK1-201ENST00000373316 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
PGK1-201ENST00000373316 PXDNQ92626 1479 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 CCAR1Q8IX12 1150 aaKnown RBP12.37□□□□□ -0.43
PGK1-201ENST00000373316 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
PGK1-201ENST00000373316 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
PGK1-201ENST00000373316 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
PGK1-201ENST00000373316 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
PGK1-201ENST00000373316 KAT6BQ8WYB5 2073 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms