RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 DICER1Q9UPY3 1922 aaKnown RBP19.49■□□□□ 0.71
C9orf16-201ENST00000372994 HOXA10P31260 410 aaPredicted RBP19.49■□□□□ 0.71
C9orf16-201ENST00000372994 TCIRG1Q13488 830 aa19.49■□□□□ 0.71
C9orf16-201ENST00000372994 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
C9orf16-201ENST00000372994 SLC10A5Q5PT55 438 aa19.49■□□□□ 0.71
C9orf16-201ENST00000372994 GLTPD2A6NH11 291 aa19.48■□□□□ 0.71
C9orf16-201ENST00000372994 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
C9orf16-201ENST00000372994 CCDC93Q567U6 631 aa19.48■□□□□ 0.71
C9orf16-201ENST00000372994 UTP14AQ9BVJ6 771 aaKnown RBP19.48■□□□□ 0.71
C9orf16-201ENST00000372994 HYPKQ9NX55 129 aa19.48■□□□□ 0.71
C9orf16-201ENST00000372994 RNF123Q5XPI4 1314 aa19.48■□□□□ 0.71
C9orf16-201ENST00000372994 ANKRD13DQ6ZTN6 518 aa19.47■□□□□ 0.71
C9orf16-201ENST00000372994 NLRP10Q86W26 655 aa19.47■□□□□ 0.71
C9orf16-201ENST00000372994 PLBD2Q8NHP8 589 aa19.47■□□□□ 0.71
C9orf16-201ENST00000372994 ANKRD36CQ5JPF3 1778 aa19.47■□□□□ 0.71
C9orf16-201ENST00000372994 WWC1Q8IX03 1113 aa19.46■□□□□ 0.71
C9orf16-201ENST00000372994 RTKN2Q8IZC4 609 aa19.46■□□□□ 0.71
C9orf16-201ENST00000372994 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
C9orf16-201ENST00000372994 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
C9orf16-201ENST00000372994 ELL2O00472 640 aaPredicted RBP19.45■□□□□ 0.7
C9orf16-201ENST00000372994 C8orf58Q8NAV2 365 aa19.45■□□□□ 0.7
C9orf16-201ENST00000372994 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
C9orf16-201ENST00000372994 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
C9orf16-201ENST00000372994 CRAMP1Q96RY5 1269 aa19.45■□□□□ 0.7
C9orf16-201ENST00000372994 HSPA6P17066 643 aa19.44■□□□□ 0.7
C9orf16-201ENST00000372994 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
C9orf16-201ENST00000372994 OLFM4Q6UX06 510 aa19.44■□□□□ 0.7
C9orf16-201ENST00000372994 C3orf67Q6ZVT6 689 aa19.44■□□□□ 0.7
C9orf16-201ENST00000372994 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
C9orf16-201ENST00000372994 CC2D2BQ6DHV5 1058 aa19.43■□□□□ 0.7
C9orf16-201ENST00000372994 DPY19L2Q6NUT2 758 aa19.43■□□□□ 0.7
C9orf16-201ENST00000372994 RBM46Q8TBY0 533 aaKnown RBP19.43■□□□□ 0.7
C9orf16-201ENST00000372994 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
C9orf16-201ENST00000372994 TRMT112Q9UI30 125 aaKnown RBP19.43■□□□□ 0.7
C9orf16-201ENST00000372994 VEGFAP15692 232 aaPredicted RBP19.42■□□□□ 0.7
C9orf16-201ENST00000372994 C16orf71Q8IYS4 520 aaPredicted RBP19.42■□□□□ 0.7
C9orf16-201ENST00000372994 ISCA1Q9BUE6 129 aa19.42■□□□□ 0.7
C9orf16-201ENST00000372994 IL16Q14005 1332 aa19.42■□□□□ 0.7
C9orf16-201ENST00000372994 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
C9orf16-201ENST00000372994 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
C9orf16-201ENST00000372994 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
C9orf16-201ENST00000372994 SYNE4Q8N205 404 aa19.41■□□□□ 0.7
C9orf16-201ENST00000372994 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
C9orf16-201ENST00000372994 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
C9orf16-201ENST00000372994 CCDC30Q5VVM6 783 aa19.4■□□□□ 0.7
C9orf16-201ENST00000372994 TSR2Q969E8 191 aaKnown RBP19.4■□□□□ 0.7
C9orf16-201ENST00000372994 PSMD1Q99460 953 aa19.4■□□□□ 0.7
C9orf16-201ENST00000372994 PHAXQ9H814 394 aaKnown RBP19.4■□□□□ 0.7
C9orf16-201ENST00000372994 POTECB2RU33 542 aa19.39■□□□□ 0.69
C9orf16-201ENST00000372994 HCLS1P14317 486 aaPredicted RBP19.39■□□□□ 0.69
C9orf16-201ENST00000372994 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
C9orf16-201ENST00000372994 ATP5J2-PTCD1G3V325 749 aa19.38■□□□□ 0.69
C9orf16-201ENST00000372994 FSTL1Q12841 308 aa19.38■□□□□ 0.69
C9orf16-201ENST00000372994 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
C9orf16-201ENST00000372994 WDR90Q96KV7 1748 aa19.38■□□□□ 0.69
C9orf16-201ENST00000372994 LAMB2P55268 1798 aa19.37■□□□□ 0.69
C9orf16-201ENST00000372994 PPEF1O14829 653 aaPredicted RBP19.37■□□□□ 0.69
C9orf16-201ENST00000372994 IARSP41252 1262 aaKnown RBP19.37■□□□□ 0.69
C9orf16-201ENST00000372994 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
C9orf16-201ENST00000372994 WDR63Q8IWG1 891 aa19.37■□□□□ 0.69
C9orf16-201ENST00000372994 ABCC4O15439 1325 aa19.36■□□□□ 0.69
C9orf16-201ENST00000372994 BBOX1O75936 387 aa19.36■□□□□ 0.69
C9orf16-201ENST00000372994 DDNO94850 711 aaPredicted RBP19.36■□□□□ 0.69
C9orf16-201ENST00000372994 FAM89AQ96GI7 184 aa19.36■□□□□ 0.69
C9orf16-201ENST00000372994 ATP6V0A2Q9Y487 856 aa19.36■□□□□ 0.69
C9orf16-201ENST00000372994 ZNF428Q96B54 188 aa19.35■□□□□ 0.69
C9orf16-201ENST00000372994 FZD9O00144 591 aa19.34■□□□□ 0.69
C9orf16-201ENST00000372994 DDX58O95786 925 aaKnown RBP19.34■□□□□ 0.69
C9orf16-201ENST00000372994 APLP1P51693 650 aa19.34■□□□□ 0.69
C9orf16-201ENST00000372994 SF3B3Q15393 1217 aaKnown RBP19.34■□□□□ 0.69
C9orf16-201ENST00000372994 TWISTNBQ3B726 338 aaPredicted RBP19.34■□□□□ 0.69
C9orf16-201ENST00000372994 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
C9orf16-201ENST00000372994 SMC1BQ8NDV3 1235 aa19.34■□□□□ 0.69
C9orf16-201ENST00000372994 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
C9orf16-201ENST00000372994 SLC51AQ86UW1 340 aa19.33■□□□□ 0.68
C9orf16-201ENST00000372994 FAM9BQ8IZU0 186 aa19.33■□□□□ 0.68
C9orf16-201ENST00000372994 L3MBTL3Q96JM7 780 aaPredicted RBP19.33■□□□□ 0.68
C9orf16-201ENST00000372994 TMX4Q9H1E5 349 aaPredicted RBP19.33■□□□□ 0.68
C9orf16-201ENST00000372994 SALL2Q9Y467 1007 aaPredicted RBP19.33■□□□□ 0.68
C9orf16-201ENST00000372994 DDX60Q8IY21 1712 aaKnown RBP19.33■□□□□ 0.68
C9orf16-201ENST00000372994 SP8Q8IXZ3 490 aa19.32■□□□□ 0.68
C9orf16-201ENST00000372994 ZBTB38Q8NAP3 1195 aaPredicted RBP19.32■□□□□ 0.68
C9orf16-201ENST00000372994 CCDC191Q8NCU4 936 aa19.32■□□□□ 0.68
C9orf16-201ENST00000372994 MYD88Q99836 296 aa19.32■□□□□ 0.68
C9orf16-201ENST00000372994 METTL22Q9BUU2 404 aaPredicted RBP19.32■□□□□ 0.68
C9orf16-201ENST00000372994 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
C9orf16-201ENST00000372994 ZNF541Q9H0D2 1346 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 TAF1P21675 1872 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 GRAPQ13588 217 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
C9orf16-201ENST00000372994 JDP2Q8WYK2 163 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 VPS33BQ9H267 617 aa19.31■□□□□ 0.68
C9orf16-201ENST00000372994 IRS4O14654 1257 aaPredicted RBP19.3■□□□□ 0.68
C9orf16-201ENST00000372994 RTL5Q5HYW3 569 aaPredicted RBP19.3■□□□□ 0.68
C9orf16-201ENST00000372994 RTFDC1Q9BY42 306 aaPredicted RBP19.3■□□□□ 0.68
C9orf16-201ENST00000372994 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
C9orf16-201ENST00000372994 SCN4AP35499 1836 aa19.3■□□□□ 0.68
C9orf16-201ENST00000372994 PI4KAP2A4QPH2 592 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms