RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
VPS37B-202ENST00000371248 SETDB2Q96T68 719 aa22.22■■□□□ 1.15
VPS37B-202ENST00000371248 DDX19BQ9UMR2 479 aa22.22■■□□□ 1.15
VPS37B-202ENST00000371248 PSDA5PKW4 1024 aaPredicted RBP22.22■■□□□ 1.15
VPS37B-202ENST00000371248 SOCS7O14512 581 aa22.22■■□□□ 1.15
VPS37B-202ENST00000371248 FAM177BA6PVY3 158 aa22.21■■□□□ 1.15
VPS37B-202ENST00000371248 NFIXQ14938 502 aa22.21■■□□□ 1.15
VPS37B-202ENST00000371248 MSL1Q68DK7 614 aa22.21■■□□□ 1.15
VPS37B-202ENST00000371248 C9orf78Q9NZ63 289 aaPredicted RBP22.21■■□□□ 1.15
VPS37B-202ENST00000371248 ZBTB7BO15156 539 aaPredicted RBP22.21■■□□□ 1.15
VPS37B-202ENST00000371248 PARP10Q53GL7 1025 aa22.21■■□□□ 1.15
VPS37B-202ENST00000371248 USP44Q9H0E7 712 aa22.21■■□□□ 1.15
VPS37B-202ENST00000371248 SUSD4Q5VX71 490 aa22.2■■□□□ 1.14
VPS37B-202ENST00000371248 EXOC6Q8TAG9 804 aa22.2■■□□□ 1.14
VPS37B-202ENST00000371248 TM4SF1P30408 202 aa22.19■■□□□ 1.14
VPS37B-202ENST00000371248 SLC16A10Q8TF71 515 aa22.19■■□□□ 1.14
VPS37B-202ENST00000371248 JARID2Q92833 1246 aaPredicted RBP22.19■■□□□ 1.14
VPS37B-202ENST00000371248 MEIS3Q99687 375 aa22.19■■□□□ 1.14
VPS37B-202ENST00000371248 CASZ1Q86V15 1759 aa22.19■■□□□ 1.14
VPS37B-202ENST00000371248 GRM8O00222 908 aa22.19■■□□□ 1.14
VPS37B-202ENST00000371248 NBPF7P0C2Y1 421 aaPredicted RBP22.18■■□□□ 1.14
VPS37B-202ENST00000371248 RTL5Q5HYW3 569 aaPredicted RBP22.18■■□□□ 1.14
VPS37B-202ENST00000371248 PPP1R42Q7Z4L9 355 aa22.18■■□□□ 1.14
VPS37B-202ENST00000371248 TRMT112Q9UI30 125 aaKnown RBP22.18■■□□□ 1.14
VPS37B-202ENST00000371248 COL24A1Q17RW2 1714 aa22.18■■□□□ 1.14
VPS37B-202ENST00000371248 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
VPS37B-202ENST00000371248 IBTKQ9P2D0 1353 aaPredicted RBP22.17■■□□□ 1.14
VPS37B-202ENST00000371248 FAM89AQ96GI7 184 aa22.17■■□□□ 1.14
VPS37B-202ENST00000371248 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
VPS37B-202ENST00000371248 H7C1W4 665 aa22.16■■□□□ 1.14
VPS37B-202ENST00000371248 UBE3BQ7Z3V4 1068 aa22.16■■□□□ 1.14
VPS37B-202ENST00000371248 ZBTB38Q8NAP3 1195 aaPredicted RBP22.16■■□□□ 1.14
VPS37B-202ENST00000371248 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
VPS37B-202ENST00000371248 GNAI3P08754 354 aa22.16■■□□□ 1.14
VPS37B-202ENST00000371248 NBPF5PQ86XG9 351 aaPredicted RBP22.16■■□□□ 1.14
VPS37B-202ENST00000371248 NTSR2O95665 410 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 PCCAP05165 728 aaPredicted RBP22.15■■□□□ 1.14
VPS37B-202ENST00000371248 MMP10P09238 476 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 UBTFL1P0CB47 393 aaPredicted RBP22.15■■□□□ 1.14
VPS37B-202ENST00000371248 DDR1Q08345 913 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 UTYO14607 1347 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 POLRMTO00411 1230 aaKnown RBP22.15■■□□□ 1.14
VPS37B-202ENST00000371248 ZBTB7AO95365 584 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 SYNE4Q8N205 404 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 ZBTB40Q9NUA8 1239 aa22.15■■□□□ 1.14
VPS37B-202ENST00000371248 SERPINB2P05120 415 aa22.14■■□□□ 1.13
VPS37B-202ENST00000371248 TPTE2Q6XPS3 522 aa22.14■■□□□ 1.13
VPS37B-202ENST00000371248 NUTM1Q86Y26 1132 aa22.14■■□□□ 1.13
VPS37B-202ENST00000371248 NYXQ9GZU5 481 aa22.14■■□□□ 1.13
VPS37B-202ENST00000371248 GTF2E1P29083 439 aaPredicted RBP22.13■■□□□ 1.13
VPS37B-202ENST00000371248 CASP7P55210 303 aa22.13■■□□□ 1.13
VPS37B-202ENST00000371248 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
VPS37B-202ENST00000371248 NPHP1O15259 732 aa22.13■■□□□ 1.13
VPS37B-202ENST00000371248 C1orf115Q9H7X2 142 aa22.13■■□□□ 1.13
VPS37B-202ENST00000371248 PARP3Q9Y6F1 533 aa22.13■■□□□ 1.13
VPS37B-202ENST00000371248 MTFR1LQ9H019 292 aa22.12■■□□□ 1.13
VPS37B-202ENST00000371248 ATF5Q9Y2D1 282 aaPredicted RBP22.12■■□□□ 1.13
VPS37B-202ENST00000371248 ERFEQ4G0M1 354 aa22.11■■□□□ 1.13
VPS37B-202ENST00000371248 GNAI2P04899 355 aa22.11■■□□□ 1.13
VPS37B-202ENST00000371248 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
VPS37B-202ENST00000371248 LRRFIP2Q9Y608 721 aaKnown RBP22.11■■□□□ 1.13
VPS37B-202ENST00000371248 IRS4O14654 1257 aaPredicted RBP22.1■■□□□ 1.13
VPS37B-202ENST00000371248 CCDC24Q8N4L8 307 aa22.1■■□□□ 1.13
VPS37B-202ENST00000371248 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
VPS37B-202ENST00000371248 CDHR2Q9BYE9 1310 aa22.1■■□□□ 1.13
VPS37B-202ENST00000371248 PRR5LQ6MZQ0 368 aa22.1■■□□□ 1.13
VPS37B-202ENST00000371248 HDAC5Q9UQL6 1122 aa22.1■■□□□ 1.13
VPS37B-202ENST00000371248 KAZALD1Q96I82 304 aa22.09■■□□□ 1.13
VPS37B-202ENST00000371248 MYH3P11055 1940 aa22.09■■□□□ 1.13
VPS37B-202ENST00000371248 DDX60Q8IY21 1712 aaKnown RBP22.09■■□□□ 1.13
VPS37B-202ENST00000371248 NRXN2Q9P2S2 1712 aa22.09■■□□□ 1.13
VPS37B-202ENST00000371248 HCLS1P14317 486 aaPredicted RBP22.08■■□□□ 1.13
VPS37B-202ENST00000371248 AAMPQ13685 434 aa22.08■■□□□ 1.12
VPS37B-202ENST00000371248 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
VPS37B-202ENST00000371248 LAMB2P55268 1798 aa22.07■■□□□ 1.12
VPS37B-202ENST00000371248 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
VPS37B-202ENST00000371248 ST5P78524 1137 aa22.07■■□□□ 1.12
VPS37B-202ENST00000371248 BICC1Q9H694 974 aaKnown RBP22.07■■□□□ 1.12
VPS37B-202ENST00000371248 SLC10A5Q5PT55 438 aa22.06■■□□□ 1.12
VPS37B-202ENST00000371248 PDE8AO60658 829 aa22.05■■□□□ 1.12
VPS37B-202ENST00000371248 POLD1P28340 1107 aa22.05■■□□□ 1.12
VPS37B-202ENST00000371248 FOXO4P98177 505 aa22.05■■□□□ 1.12
VPS37B-202ENST00000371248 PLA2G12BQ9BX93 195 aa22.05■■□□□ 1.12
VPS37B-202ENST00000371248 HSP90B1P14625 803 aaKnown RBP22.05■■□□□ 1.12
VPS37B-202ENST00000371248 PCDHB15Q9Y5E8 787 aa22.04■■□□□ 1.12
VPS37B-202ENST00000371248 LMBR1LQ6UX01 489 aa22.03■■□□□ 1.12
VPS37B-202ENST00000371248 ANKRD44Q8N8A2 993 aa22.03■■□□□ 1.12
VPS37B-202ENST00000371248 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
VPS37B-202ENST00000371248 CEP85Q6P2H3 762 aa22.02■■□□□ 1.12
VPS37B-202ENST00000371248 NLRP3Q96P20 1036 aa22.02■■□□□ 1.12
VPS37B-202ENST00000371248 ANKRD31Q8N7Z5 1873 aa22.02■■□□□ 1.12
VPS37B-202ENST00000371248 CTSWP56202 376 aa22.02■■□□□ 1.11
VPS37B-202ENST00000371248 RABL6Q3YEC7 729 aaPredicted RBP22.02■■□□□ 1.11
VPS37B-202ENST00000371248 CCDC85AQ96PX6 553 aaPredicted RBP22.02■■□□□ 1.11
VPS37B-202ENST00000371248 TNRC6CQ9HCJ0 1690 aaKnown RBP22.02■■□□□ 1.11
VPS37B-202ENST00000371248 C3orf67Q6ZVT6 689 aa22.01■■□□□ 1.11
VPS37B-202ENST00000371248 RPAP2Q8IXW5 612 aaPredicted RBP22.01■■□□□ 1.11
VPS37B-202ENST00000371248 TTLL11Q8NHH1 800 aa22.01■■□□□ 1.11
VPS37B-202ENST00000371248 SGIP1Q9BQI5 828 aa22.01■■□□□ 1.11
VPS37B-202ENST00000371248 CHMP3Q9Y3E7 222 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms