RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 TMEM87AQ8NBN3 555 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 MYD88Q99836 296 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 ATG3Q9NT62 314 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 ZDHHC9Q9Y397 364 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 CYP27B1O15528 508 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 SASH1O94885 1247 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 NASPP49321 788 aaPredicted RBP12.26□□□□□ -0.45
TPM3-209ENST00000368527 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
TPM3-209ENST00000368527 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 LRP10Q7Z4F1 713 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
TPM3-209ENST00000368527 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 PPP1R9BQ96SB3 815 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
TPM3-209ENST00000368527 SMC3Q9UQE7 1217 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
TPM3-209ENST00000368527 JCADQ9P266 1359 aa12.26□□□□□ -0.45
TPM3-209ENST00000368527 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
TPM3-209ENST00000368527 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
TPM3-209ENST00000368527 KCNJ4P48050 445 aa12.25□□□□□ -0.45
TPM3-209ENST00000368527 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
TPM3-209ENST00000368527 ZSCAN23Q3MJ62 389 aa12.25□□□□□ -0.45
TPM3-209ENST00000368527 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
TPM3-209ENST00000368527 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
TPM3-209ENST00000368527 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
TPM3-209ENST00000368527 STRCP1A6NGW2 1772 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 ZSCAN22P10073 491 aaPredicted RBP12.24□□□□□ -0.45
TPM3-209ENST00000368527 MYL6BP14649 208 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 CLCN1P35523 988 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 SLC39A6Q13433 755 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 CAVIN1Q6NZI2 390 aaKnown RBP12.24□□□□□ -0.45
TPM3-209ENST00000368527 LRSAM1Q6UWE0 723 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 FSD1Q9BTV5 496 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 PRDM11Q9NQV5 511 aa12.24□□□□□ -0.45
TPM3-209ENST00000368527 RNF216Q9NWF9 866 aaPredicted RBP12.24□□□□□ -0.45
TPM3-209ENST00000368527 PA2G4Q9UQ80 394 aaKnown RBP12.24□□□□□ -0.45
TPM3-209ENST00000368527 MED23Q9ULK4 1368 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 H7C1W4 665 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
TPM3-209ENST00000368527 MAP4K4O95819 1239 aaPredicted RBP12.23□□□□□ -0.45
TPM3-209ENST00000368527 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
TPM3-209ENST00000368527 AK2P54819 239 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 TNNI3KQ59H18 835 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 CWC25Q9NXE8 425 aaPredicted RBP12.23□□□□□ -0.45
TPM3-209ENST00000368527 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
TPM3-209ENST00000368527 FPGT-TNNI3KV9GXZ4 949 aa12.23□□□□□ -0.45
TPM3-209ENST00000368527 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 COL5A2P05997 1499 aaPredicted RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 A0A087WZG4 1122 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 STX6O43752 255 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 CIAO1O76071 339 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 IL2RBP14784 551 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 RFX5P48382 616 aaPredicted RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 PTPN12Q05209 780 aaKnown RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 PKP1Q13835 747 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 CREB3L3Q68CJ9 461 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM3-209ENST00000368527 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
TPM3-209ENST00000368527 USP16Q9Y5T5 823 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 UBR2Q8IWV8 1755 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 ARFGEF2Q9Y6D5 1785 aa12.22□□□□□ -0.45
TPM3-209ENST00000368527 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
TPM3-209ENST00000368527 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.45
TPM3-209ENST00000368527 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.45
TPM3-209ENST00000368527 BLOC1S2Q6QNY1 142 aa12.21□□□□□ -0.45
TPM3-209ENST00000368527 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
TPM3-209ENST00000368527 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
TPM3-209ENST00000368527 HAUS7Q99871 368 aa12.21□□□□□ -0.45
TPM3-209ENST00000368527 GLI3P10071 1580 aa12.21□□□□□ -0.46
TPM3-209ENST00000368527 ABCC12Q96J65 1359 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 ESPNB1AK53 854 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 SLC27A2O14975 620 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 MCM5P33992 734 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 CASP7P55210 303 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 UBE2HP62256 183 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 UVSSAQ2YD98 709 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 UBE3BQ7Z3V4 1068 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 GPT2Q8TD30 523 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
TPM3-209ENST00000368527 IL25Q9H293 177 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms