RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 PNMA6EA0A0J9YXQ4 647 aa13.63□□□□□ -0.23
COPA-202ENST00000368069 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
COPA-202ENST00000368069 CPA1P15085 419 aa13.63□□□□□ -0.23
COPA-202ENST00000368069 BIN1O00499 593 aa13.63□□□□□ -0.23
COPA-202ENST00000368069 ZSCAN16Q9H4T2 348 aaPredicted RBP13.63□□□□□ -0.23
COPA-202ENST00000368069 GPTP24298 496 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
COPA-202ENST00000368069 POLR3DP05423 398 aaPredicted RBP13.62□□□□□ -0.23
COPA-202ENST00000368069 FAM200AQ8TCP9 573 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 TRMT1Q9NXH9 659 aaKnown RBP13.62□□□□□ -0.23
COPA-202ENST00000368069 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
COPA-202ENST00000368069 USP19O94966 1318 aa13.62□□□□□ -0.23
COPA-202ENST00000368069 SYT1P21579 422 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 LMBR1LQ6UX01 489 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 Q6ZUG5 572 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 RUFY1Q96T51 708 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
COPA-202ENST00000368069 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
COPA-202ENST00000368069 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 ANKRD18BA2A2Z9 1011 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 MINDY4BA8MYZ0 360 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 KIF18AQ8NI77 898 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 KIF24Q5T7B8 1368 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 GOLGA8AA7E2F4 631 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 KCNA6P17658 529 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 HS1BP3Q53T59 392 aa13.61□□□□□ -0.23
COPA-202ENST00000368069 DYNC1I1O14576 645 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.232e-11■■■■□ 20.1
COPA-202ENST00000368069 CEP131Q9UPN4 1083 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 KIAA0232Q92628 1395 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 CBX1P83916 185 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 SLC12A7Q9Y666 1083 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 IP6K1Q92551 441 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
COPA-202ENST00000368069 NEMFO60524 1076 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 EPS15P42566 896 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 STIM1Q13586 685 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 AK7Q96M32 723 aa13.6□□□□□ -0.23
COPA-202ENST00000368069 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
COPA-202ENST00000368069 OFD1O75665 1012 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 CAVIN2O95810 425 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 UBXN4Q92575 508 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 BICC1Q9H694 974 aaKnown RBP13.59□□□□□ -0.23
COPA-202ENST00000368069 ZNHIT6Q9NWK9 470 aaKnown RBP13.59□□□□□ -0.23
COPA-202ENST00000368069 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 CCDC66A2RUB6 948 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 ERCC4Q92889 916 aaPredicted RBP13.59□□□□□ -0.23
COPA-202ENST00000368069 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 PRDM10Q9NQV6 1147 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 SHROOM2Q13796 1616 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 NCOA7Q8NI08 942 aa13.59□□□□□ -0.23
COPA-202ENST00000368069 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.23
COPA-202ENST00000368069 TMC6Q7Z403 805 aa13.58□□□□□ -0.23
COPA-202ENST00000368069 MICU3Q86XE3 530 aa13.58□□□□□ -0.23
COPA-202ENST00000368069 LMBRD1Q9NUN5 540 aa13.58□□□□□ -0.23
COPA-202ENST00000368069 KIF1BO60333 1816 aa13.58□□□□□ -0.23
COPA-202ENST00000368069 KLF18A0A0U1RQI7 1052 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
COPA-202ENST00000368069 KLHL10Q6JEL2 608 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
COPA-202ENST00000368069 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 CNNM3Q8NE01 707 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 AOX1Q06278 1338 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 CCDC196A0A1B0GTZ2 297 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 SLC5A1P13866 664 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 CROCC2H7BZ55 1655 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 SGSM2O43147 1006 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 ZNF445P59923 1031 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 SSRP1Q08945 709 aaKnown RBP13.58□□□□□ -0.24
COPA-202ENST00000368069 DNAJC25Q9H1X3 360 aa13.58□□□□□ -0.24
COPA-202ENST00000368069 GCP02774 474 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 IARSP41252 1262 aaKnown RBP13.57□□□□□ -0.24
COPA-202ENST00000368069 GSDMDP57764 484 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 TYRO3Q06418 890 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
COPA-202ENST00000368069 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 RAD50Q92878 1312 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 METAP2P50579 478 aaKnown RBP eCLIP13.57□□□□□ -0.245e-7■■□□□ 11.4
COPA-202ENST00000368069 TFCP2Q12800 502 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms