RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CFAP70Q5T0N1 1121 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 TRIM47Q96LD4 638 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 IFIT3O14879 490 aaKnown RBP19.14■□□□□ 0.65
NID1-202ENST00000366595 ESCO1Q5FWF5 840 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 SPAG5Q96R06 1193 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 SERPINA10Q9UK55 444 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
NID1-202ENST00000366595 UBASH3AP57075 661 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
NID1-202ENST00000366595 GBP6Q6ZN66 633 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 SKILP12757 684 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 GJB2P29033 226 aa19.14■□□□□ 0.65
NID1-202ENST00000366595 LACTBP83111 547 aaPredicted RBP19.14■□□□□ 0.65
NID1-202ENST00000366595 CTAGE9A4FU28 777 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 MCM6Q14566 821 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 HS1BP3Q53T59 392 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 EVI5LQ96CN4 794 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 CCDC114Q96M63 670 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 ZSWIM4Q9H7M6 989 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 EXOC1Q9NV70 894 aa19.13■□□□□ 0.65
NID1-202ENST00000366595 BIN1O00499 593 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 STARD3NLO95772 234 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 SAMD15Q9P1V8 674 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 ZNF652Q9Y2D9 606 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
NID1-202ENST00000366595 FAM200AQ8TCP9 573 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 DNAI1Q9UI46 699 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 PPM1FP49593 454 aaPredicted RBP19.12■□□□□ 0.65
NID1-202ENST00000366595 SYCP3Q8IZU3 236 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 TPD52P55327 224 aaPredicted RBP19.12■□□□□ 0.65
NID1-202ENST00000366595 GUCY1B3Q02153 619 aa19.12■□□□□ 0.65
NID1-202ENST00000366595 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 A6NNZ2 444 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 NDC80O14777 642 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 TUBB8Q3ZCM7 444 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 PAIP2Q9BPZ3 127 aaKnown RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 LUC7L2Q9Y383 392 aaKnown RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 KRT86O43790 486 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 RANBP6O60518 1105 aaKnown RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 TBCAO75347 108 aaKnown RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 ZSCAN23Q3MJ62 389 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 SPTY2D1Q68D10 685 aaPredicted RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 CPLX4Q7Z7G2 160 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 RPUSD2Q8IZ73 545 aaKnown RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 CCDC94Q9BW85 323 aaPredicted RBP19.11■□□□□ 0.65
NID1-202ENST00000366595 TOM1L2Q6ZVM7 507 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 ERMNQ8TAM6 284 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 RASSF4Q9H2L5 321 aa19.11■□□□□ 0.65
NID1-202ENST00000366595 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 JAKMIP2Q96AA8 810 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 IFT74Q96LB3 600 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 BOLA2Q9H3K6 86 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 MIPOL1Q8TD10 442 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 SLC5A1P13866 664 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 TTF1Q15361 905 aaPredicted RBP19.1■□□□□ 0.65
NID1-202ENST00000366595 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
NID1-202ENST00000366595 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 ATP2A2P16615 1042 aaKnown RBP19.09■□□□□ 0.65
NID1-202ENST00000366595 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
NID1-202ENST00000366595 SYKP43405 635 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 TRAF1Q13077 416 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 BMP2KLQ5H9B9 411 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 ORC3Q9UBD5 711 aaPredicted RBP19.09■□□□□ 0.65
NID1-202ENST00000366595 MTRF1LQ9UGC7 380 aaKnown RBP19.09■□□□□ 0.65
NID1-202ENST00000366595 FAM184BQ9ULE4 1060 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 ZKSCAN5Q9Y2L8 839 aa19.09■□□□□ 0.65
NID1-202ENST00000366595 A0A1B0GUL7 405 aa19.08■□□□□ 0.65
NID1-202ENST00000366595 PSMC4P43686 418 aa19.08■□□□□ 0.65
NID1-202ENST00000366595 VAV2P52735 878 aa19.08■□□□□ 0.65
NID1-202ENST00000366595 APBB1IPQ7Z5R6 666 aaPredicted RBP19.08■□□□□ 0.65
NID1-202ENST00000366595 CDK19Q9BWU1 502 aa19.08■□□□□ 0.65
NID1-202ENST00000366595 SWAP70Q9UH65 585 aa19.08■□□□□ 0.65
NID1-202ENST00000366595 LMNTD2Q8IXW0 634 aa19.08■□□□□ 0.64
NID1-202ENST00000366595 SLC12A5Q9H2X9 1139 aa19.08■□□□□ 0.64
NID1-202ENST00000366595 KIF5AQ12840 1032 aa19.08■□□□□ 0.64
NID1-202ENST00000366595 B4GALNT4Q76KP1 1039 aa19.08■□□□□ 0.64
NID1-202ENST00000366595 CACNA2D3Q8IZS8 1091 aa19.08■□□□□ 0.64
NID1-202ENST00000366595 HMGB1P1B2RPK0 211 aaPredicted RBP19.07■□□□□ 0.64
NID1-202ENST00000366595 FMNL3Q8IVF7 1028 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 TFIP11Q9UBB9 837 aaKnown RBP19.07■□□□□ 0.64
NID1-202ENST00000366595 DUSP27Q5VZP5 1158 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 STMN2Q93045 179 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 SELENOSQ9BQE4 189 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 TRIM7Q9C029 511 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 OGFRQ9NZT2 677 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 PUF60Q9UHX1 559 aaKnown RBP19.07■□□□□ 0.64
NID1-202ENST00000366595 CIB2O75838 187 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
NID1-202ENST00000366595 CEP128Q6ZU80 1094 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 KRT13P13646 458 aa19.07■□□□□ 0.64
NID1-202ENST00000366595 DNAJC21Q5F1R6 531 aaKnown RBP19.07■□□□□ 0.64
NID1-202ENST00000366595 PSMA7O14818 248 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 FAM76AQ8TAV0 307 aa19.06■□□□□ 0.64
NID1-202ENST00000366595 ZSCAN22P10073 491 aaPredicted RBP19.06■□□□□ 0.64
NID1-202ENST00000366595 ATP5DP30049 168 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms