RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 GBP3Q9H0R5 595 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 SAMM50Q9Y512 469 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
CTNND1-203ENST00000361391 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 MAP9Q49MG5 647 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 TSPY2A6NKD2 308 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 PRC1O43663 620 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
CTNND1-203ENST00000361391 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
CTNND1-203ENST00000361391 USO1O60763 962 aaKnown RBP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 CEBPAP49715 358 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 SPECC1Q5M775 1068 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 CEP135Q66GS9 1140 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 ORC3Q9UBD5 711 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 CETN2P41208 172 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 IARSP41252 1262 aaKnown RBP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 VPS36Q86VN1 386 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 PI4KAP2A4QPH2 592 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 F8W031 263 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 KCNA4P22459 653 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 LMAN1P49257 510 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 TTC22Q5TAA0 569 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 PI4KAP1Q8N8J0 262 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 CCDC12Q8WUD4 166 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 NEK1Q96PY6 1258 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 INCENPQ9NQS7 918 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 PAFAH1B1P43034 410 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 SYCP3Q8IZU3 236 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 GPATCH11Q8N954 259 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 RGS22Q8NE09 1264 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNND1-203ENST00000361391 CHRNA2Q15822 529 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 FAM135AQ9P2D6 1515 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 DISP3Q9P2K9 1392 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 RPGRIP1LQ68CZ1 1315 aa9.28□□□□□ -0.92
CTNND1-203ENST00000361391 LDHAL6AQ6ZMR3 332 aa9.27□□□□□ -0.92
CTNND1-203ENST00000361391 CALML4Q96GE6 196 aa9.27□□□□□ -0.92
CTNND1-203ENST00000361391 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.92
CTNND1-203ENST00000361391 HYPKQ9NX55 129 aa9.27□□□□□ -0.92
CTNND1-203ENST00000361391 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 FERMT2Q96AC1 680 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 CAMSAP2Q08AD1 1489 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 NF2P35240 595 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 ANO6Q4KMQ2 910 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 MFSD6Q6ZSS7 791 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 ECHDC1Q9NTX5 307 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 V9GYY5 206 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 ZNF165P49910 485 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 GNG11P61952 73 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 CHST3Q7LGC8 479 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 CCDC150Q8NCX0 1101 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 PTGS1P23219 599 aa9.27□□□□□ -0.93
CTNND1-203ENST00000361391 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 DBF4Q9UBU7 674 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-203ENST00000361391 SBNO2Q9Y2G9 1366 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 FEZ1Q99689 392 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 RAB34Q9BZG1 259 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 CHPF2Q9P2E5 772 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 KLF18A0A0U1RQI7 1052 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 GCOM1H8Y6P7 765 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 CTAGE5O15320 804 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 MYZAPP0CAP1 466 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 BRF1Q92994 677 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 TMX3Q96JJ7 454 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 CWC25Q9NXE8 425 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 TRIM21P19474 475 aaKnown RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 RRAGBQ5VZM2 374 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 NGLY1Q96IV0 654 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 COMMD10Q9Y6G5 202 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 BICD1Q96G01 975 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 MEIS3Q99687 375 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 FGFR1OPO95684 399 aaKnown RBP9.26□□□□□ -0.93
CTNND1-203ENST00000361391 SDSP20132 328 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 TCP11L1Q9NUJ3 509 aa9.26□□□□□ -0.93
CTNND1-203ENST00000361391 GJC1P36383 396 aa9.25□□□□□ -0.93
CTNND1-203ENST00000361391 USP48Q86UV5 1035 aa9.25□□□□□ -0.93
CTNND1-203ENST00000361391 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.933e-7■□□□□ 10.1
CTNND1-203ENST00000361391 PAIP2Q9BPZ3 127 aaKnown RBP9.25□□□□□ -0.93
CTNND1-203ENST00000361391 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
CTNND1-203ENST00000361391 PTPRCP08575 1304 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms