RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 ZFYP08048 801 aaPredicted RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 HAND2P61296 217 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 BICC1Q9H694 974 aaKnown RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
CTR9-201ENST00000361367 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
CTR9-201ENST00000361367 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
CTR9-201ENST00000361367 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
CTR9-201ENST00000361367 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
CTR9-201ENST00000361367 PHKG2P15735 406 aa16.3■□□□□ 0.2
CTR9-201ENST00000361367 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
CTR9-201ENST00000361367 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
CTR9-201ENST00000361367 ZBTB7BO15156 539 aaPredicted RBP16.29■□□□□ 0.2
CTR9-201ENST00000361367 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
CTR9-201ENST00000361367 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 PDE4CQ08493 712 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 NBPF14Q5TI25 921 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
CTR9-201ENST00000361367 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 KRT18P05783 430 aaKnown RBP16.29■□□□□ 0.2
CTR9-201ENST00000361367 USP19O94966 1318 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 SH3TC1Q8TE82 1336 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 KDM5CP41229 1560 aa16.29■□□□□ 0.2
CTR9-201ENST00000361367 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
CTR9-201ENST00000361367 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
CTR9-201ENST00000361367 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
CTR9-201ENST00000361367 SMC5Q8IY18 1101 aa16.28■□□□□ 0.2
CTR9-201ENST00000361367 CYP7A1P22680 504 aa16.28■□□□□ 0.2
CTR9-201ENST00000361367 SEC63Q9UGP8 760 aaKnown RBP16.27■□□□□ 0.2
CTR9-201ENST00000361367 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.2
CTR9-201ENST00000361367 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.2
CTR9-201ENST00000361367 CRNKL1Q9BZJ0 848 aaKnown RBP16.27■□□□□ 0.2
CTR9-201ENST00000361367 FAM13BQ9NYF5 915 aa16.27■□□□□ 0.2
CTR9-201ENST00000361367 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
CTR9-201ENST00000361367 SLC9C2Q5TAH2 1124 aa16.27■□□□□ 0.19
CTR9-201ENST00000361367 ZMYM4Q5VZL5 1548 aa16.27■□□□□ 0.19
CTR9-201ENST00000361367 TFCP2Q12800 502 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 ZGPATQ8N5A5 531 aaKnown RBP16.26■□□□□ 0.19
CTR9-201ENST00000361367 LARP6Q9BRS8 491 aaKnown RBP16.26■□□□□ 0.19
CTR9-201ENST00000361367 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
CTR9-201ENST00000361367 GSTO1P78417 241 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 PDE4BQ07343 736 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 CNBD1Q8NA66 436 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 NASPP49321 788 aaPredicted RBP16.26■□□□□ 0.19
CTR9-201ENST00000361367 MFSD6Q6ZSS7 791 aa16.26■□□□□ 0.19
CTR9-201ENST00000361367 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
CTR9-201ENST00000361367 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
CTR9-201ENST00000361367 TSPY2A6NKD2 308 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 GOLGA8AA7E2F4 631 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
CTR9-201ENST00000361367 CCDC96Q2M329 555 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 KCNQ3O43525 872 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 MRE11P49959 708 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 GIGYF1O75420 1035 aaPredicted RBP16.25■□□□□ 0.19
CTR9-201ENST00000361367 CCT2P78371 535 aaKnown RBP16.25■□□□□ 0.19
CTR9-201ENST00000361367 NAA16Q6N069 864 aaPredicted RBP16.25■□□□□ 0.19
CTR9-201ENST00000361367 CATIPQ7Z7H3 387 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
CTR9-201ENST00000361367 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
CTR9-201ENST00000361367 HLA-DOAP06340 250 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 EPS15P42566 896 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 TMEM67Q5HYA8 995 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 ESYT1Q9BSJ8 1104 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 POLD1P28340 1107 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 ZNF76P36508 570 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 TSPY26PQ9H489 355 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTR9-201ENST00000361367 SLC4A8Q2Y0W8 1093 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
CTR9-201ENST00000361367 MCM4P33991 863 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 F8W031 263 aaPredicted RBP16.23■□□□□ 0.19
CTR9-201ENST00000361367 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 EYA2O00167 538 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 ANKRD2Q9GZV1 360 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
CTR9-201ENST00000361367 CLTCL1P53675 1640 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 ITGA6P23229 1130 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms