RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 RPGRQ92834 1020 aaKnown RBP27.92■■■□□ 2.06
CD47-202ENST00000361309 PNMA8AQ86V59 439 aaPredicted RBP27.91■■■□□ 2.06
CD47-202ENST00000361309 GPC2Q8N158 579 aa27.91■■■□□ 2.06
CD47-202ENST00000361309 JDP2Q8WYK2 163 aa27.91■■■□□ 2.06
CD47-202ENST00000361309 RIC1Q4ADV7 1423 aa27.91■■■□□ 2.06
CD47-202ENST00000361309 COL4A5P29400 1685 aa27.91■■■□□ 2.06
CD47-202ENST00000361309 IBTKQ9P2D0 1353 aaPredicted RBP27.9■■■□□ 2.06
CD47-202ENST00000361309 SUSD4Q5VX71 490 aa27.9■■■□□ 2.06
CD47-202ENST00000361309 CC2D2BQ6DHV5 1058 aa27.9■■■□□ 2.06
CD47-202ENST00000361309 FOXN1O15353 648 aa27.89■■■□□ 2.06
CD47-202ENST00000361309 HOXA10P31260 410 aaPredicted RBP27.89■■■□□ 2.06
CD47-202ENST00000361309 VEGFBP49765 207 aa27.89■■■□□ 2.06
CD47-202ENST00000361309 MAP1SQ66K74 1059 aaPredicted RBP27.89■■■□□ 2.06
CD47-202ENST00000361309 ZNF34Q8IZ26 560 aa27.88■■■□□ 2.05
CD47-202ENST00000361309 CNTROBQ8N137 903 aa27.88■■■□□ 2.05
CD47-202ENST00000361309 LTBP1Q14766 1721 aa27.87■■■□□ 2.05
CD47-202ENST00000361309 GJA3Q9Y6H8 435 aa27.87■■■□□ 2.05
CD47-202ENST00000361309 MAPK8IP3Q9UPT6 1336 aa27.87■■■□□ 2.05
CD47-202ENST00000361309 EIF6P56537 245 aaKnown RBP27.86■■■□□ 2.05
CD47-202ENST00000361309 GIGYF2Q6Y7W6 1299 aaKnown RBP27.86■■■□□ 2.05
CD47-202ENST00000361309 SLC51AQ86UW1 340 aa27.86■■■□□ 2.05
CD47-202ENST00000361309 RBM17Q96I25 401 aaKnown RBP27.86■■■□□ 2.05
CD47-202ENST00000361309 PNNQ9H307 717 aaKnown RBP27.86■■■□□ 2.05
CD47-202ENST00000361309 TCERG1O14776 1098 aaKnown RBP27.85■■■□□ 2.05
CD47-202ENST00000361309 NTSR2O95665 410 aa27.85■■■□□ 2.05
CD47-202ENST00000361309 CRAMP1Q96RY5 1269 aa27.85■■■□□ 2.05
CD47-202ENST00000361309 ERBB4Q15303 1308 aa27.85■■■□□ 2.05
CD47-202ENST00000361309 PPEF1O14829 653 aaPredicted RBP27.84■■■□□ 2.05
CD47-202ENST00000361309 GRIPAP1Q4V328 841 aa27.84■■■□□ 2.05
CD47-202ENST00000361309 C3orf67Q6ZVT6 689 aa27.84■■■□□ 2.05
CD47-202ENST00000361309 LARGE2Q8N3Y3 721 aa27.84■■■□□ 2.05
CD47-202ENST00000361309 PPP1R42Q7Z4L9 355 aa27.83■■■□□ 2.05
CD47-202ENST00000361309 TSPYL4Q9UJ04 414 aa27.83■■■□□ 2.05
CD47-202ENST00000361309 LAMB2P55268 1798 aa27.82■■■□□ 2.04
CD47-202ENST00000361309 ANKRD36CQ5JPF3 1778 aa27.82■■■□□ 2.04
CD47-202ENST00000361309 AIDAQ96BJ3 306 aa27.82■■■□□ 2.04
CD47-202ENST00000361309 TRPM7Q96QT4 1865 aa27.81■■■□□ 2.04
CD47-202ENST00000361309 LMOD1P29536 600 aaPredicted RBP27.81■■■□□ 2.04
CD47-202ENST00000361309 RASSF10A6NK89 507 aa27.8■■■□□ 2.04
CD47-202ENST00000361309 EIF2S2P20042 333 aaKnown RBP27.8■■■□□ 2.04
CD47-202ENST00000361309 DEFB115Q30KQ5 88 aa27.8■■■□□ 2.04
CD47-202ENST00000361309 PARP10Q53GL7 1025 aa27.8■■■□□ 2.04
CD47-202ENST00000361309 LRP10Q7Z4F1 713 aa27.8■■■□□ 2.04
CD47-202ENST00000361309 NLRP3Q96P20 1036 aa27.8■■■□□ 2.04
CD47-202ENST00000361309 PRDM10Q9NQV6 1147 aa27.8■■■□□ 2.04
CD47-202ENST00000361309 EPS15P42566 896 aa27.79■■■□□ 2.04
CD47-202ENST00000361309 CTCFP49711 727 aaPredicted RBP27.79■■■□□ 2.04
CD47-202ENST00000361309 SCNN1DP51172 638 aa27.79■■■□□ 2.04
CD47-202ENST00000361309 PDIA6Q15084 440 aa27.79■■■□□ 2.04
CD47-202ENST00000361309 WBP1LQ9NX94 342 aa27.79■■■□□ 2.04
CD47-202ENST00000361309 ANXA1P04083 346 aa27.77■■■□□ 2.04
CD47-202ENST00000361309 RIPK4P57078 832 aa27.77■■■□□ 2.04
CD47-202ENST00000361309 PROSER3Q2NL68 480 aa27.77■■■□□ 2.04
CD47-202ENST00000361309 NIM1KQ8IY84 436 aa27.77■■■□□ 2.04
CD47-202ENST00000361309 UTP14AQ9BVJ6 771 aaKnown RBP27.77■■■□□ 2.04
CD47-202ENST00000361309 DDX21Q9NR30 783 aaKnown RBP eCLIP27.77■■■□□ 2.04
CD47-202ENST00000361309 ABT1Q9ULW3 272 aaKnown RBP27.77■■■□□ 2.04
CD47-202ENST00000361309 PPIP5K2O43314 1243 aa27.76■■■□□ 2.03
CD47-202ENST00000361309 SLC10A5Q5PT55 438 aa27.76■■■□□ 2.03
CD47-202ENST00000361309 TAF1P21675 1872 aa27.76■■■□□ 2.03
CD47-202ENST00000361309 AOC3Q16853 763 aa27.75■■■□□ 2.03
CD47-202ENST00000361309 TMX4Q9H1E5 349 aaPredicted RBP27.75■■■□□ 2.03
CD47-202ENST00000361309 ATP6V0A2Q9Y487 856 aa27.75■■■□□ 2.03
CD47-202ENST00000361309 ABCC4O15439 1325 aa27.74■■■□□ 2.03
CD47-202ENST00000361309 WDR33Q9C0J8 1336 aaKnown RBP27.74■■■□□ 2.03
CD47-202ENST00000361309 FMR1Q06787 632 aaKnown RBP eCLIP27.74■■■□□ 2.03
CD47-202ENST00000361309 LBX1P52954 281 aa27.73■■■□□ 2.03
CD47-202ENST00000361309 USP50Q70EL3 339 aaPredicted RBP27.73■■■□□ 2.03
CD47-202ENST00000361309 NECTIN2Q92692 538 aa27.72■■■□□ 2.03
CD47-202ENST00000361309 BABAM1Q9NWV8 329 aa27.72■■■□□ 2.03
CD47-202ENST00000361309 COPS6Q7L5N1 327 aa27.71■■■□□ 2.03
CD47-202ENST00000361309 VPS33BQ9H267 617 aa27.71■■■□□ 2.03
CD47-202ENST00000361309 TMPOP42166 694 aaKnown RBP27.7■■■□□ 2.02
CD47-202ENST00000361309 AIMP1Q12904 312 aaKnown RBP27.7■■■□□ 2.02
CD47-202ENST00000361309 TRAF5O00463 557 aa27.69■■■□□ 2.02
CD47-202ENST00000361309 HCLS1P14317 486 aaPredicted RBP27.69■■■□□ 2.02
CD47-202ENST00000361309 MAP2K1Q02750 393 aaPredicted RBP27.69■■■□□ 2.02
CD47-202ENST00000361309 SUPT20HQ8NEM7 779 aa27.69■■■□□ 2.02
CD47-202ENST00000361309 XAGE3Q8WTP9 111 aa27.69■■■□□ 2.02
CD47-202ENST00000361309 GPRC5DQ9NZD1 345 aa27.69■■■□□ 2.02
CD47-202ENST00000361309 HSPA8P11142 646 aaKnown RBP27.68■■■□□ 2.02
CD47-202ENST00000361309 CXCL9Q07325 125 aa27.68■■■□□ 2.02
CD47-202ENST00000361309 LMOD3Q0VAK6 560 aa27.68■■■□□ 2.02
CD47-202ENST00000361309 HSP90AB3PQ58FF7 597 aa27.68■■■□□ 2.02
CD47-202ENST00000361309 NLRP10Q86W26 655 aa27.68■■■□□ 2.02
CD47-202ENST00000361309 RTFDC1Q9BY42 306 aaPredicted RBP27.68■■■□□ 2.02
CD47-202ENST00000361309 ADARB2Q9NS39 739 aaKnown RBP27.68■■■□□ 2.02
CD47-202ENST00000361309 ZNRF3Q9ULT6 936 aa27.68■■■□□ 2.02
CD47-202ENST00000361309 THSD7BQ9C0I4 1608 aa27.67■■■□□ 2.02
CD47-202ENST00000361309 BBOX1O75936 387 aa27.67■■■□□ 2.02
CD47-202ENST00000361309 CST9Q5W186 159 aa27.67■■■□□ 2.02
CD47-202ENST00000361309 DPP8Q6V1X1 898 aaPredicted RBP27.67■■■□□ 2.02
CD47-202ENST00000361309 PAXIP1Q6ZW49 1069 aaPredicted RBP27.67■■■□□ 2.02
CD47-202ENST00000361309 SP8Q8IXZ3 490 aa27.67■■■□□ 2.02
CD47-202ENST00000361309 CAPNS2Q96L46 248 aa27.66■■■□□ 2.02
CD47-202ENST00000361309 TRMT112Q9UI30 125 aaKnown RBP27.66■■■□□ 2.02
CD47-202ENST00000361309 TCIRG1Q13488 830 aa27.65■■■□□ 2.02
CD47-202ENST00000361309 RALBP1Q15311 655 aa27.65■■■□□ 2.02
CD47-202ENST00000361309 MPNDQ8N594 471 aa27.65■■■□□ 2.02
CD47-202ENST00000361309 DDX60Q8IY21 1712 aaKnown RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms