RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 KIF20AO95235 890 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 ANO6Q4KMQ2 910 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 DAAM2Q86T65 1068 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 N4BP3O15049 544 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 CKAP4Q07065 602 aaKnown RBP18.38■□□□□ 0.53
COL18A1-203ENST00000359759 TBC1D9Q6ZT07 1266 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 SLC5A1P13866 664 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 BICD1Q96G01 975 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 PRDM11Q9NQV5 511 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 DNAI1Q9UI46 699 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 GOLGA6L9A6NEM1 432 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 PABPN1LA6NDY0 278 aaKnown RBP18.38■□□□□ 0.53
COL18A1-203ENST00000359759 ZNF354CQ86Y25 554 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-203ENST00000359759 EXOC1Q9NV70 894 aa18.38■□□□□ 0.53
COL18A1-203ENST00000359759 IFIT5Q13325 482 aaKnown RBP18.37■□□□□ 0.53
COL18A1-203ENST00000359759 RRAGBQ5VZM2 374 aa18.37■□□□□ 0.53
COL18A1-203ENST00000359759 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
COL18A1-203ENST00000359759 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
COL18A1-203ENST00000359759 KRT13P13646 458 aa18.37■□□□□ 0.53
COL18A1-203ENST00000359759 TTLL12Q14166 644 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-203ENST00000359759 CAPZA3Q96KX2 299 aa18.37■□□□□ 0.53
COL18A1-203ENST00000359759 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
COL18A1-203ENST00000359759 CEP57Q86XR8 500 aa18.36■□□□□ 0.53
COL18A1-203ENST00000359759 IARSP41252 1262 aaKnown RBP18.36■□□□□ 0.53
COL18A1-203ENST00000359759 MRPS9P82933 396 aaKnown RBP18.36■□□□□ 0.53
COL18A1-203ENST00000359759 CCDC63Q8NA47 563 aa18.36■□□□□ 0.53
COL18A1-203ENST00000359759 METAP2P50579 478 aaKnown RBP eCLIP18.36■□□□□ 0.537e-7■□□□□ 10.6
COL18A1-203ENST00000359759 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
COL18A1-203ENST00000359759 SNRKQ9NRH2 765 aa18.36■□□□□ 0.53
COL18A1-203ENST00000359759 UBE2HP62256 183 aa18.36■□□□□ 0.53
COL18A1-203ENST00000359759 DNAJC21Q5F1R6 531 aaKnown RBP18.36■□□□□ 0.53
COL18A1-203ENST00000359759 CFAP57Q96MR6 1250 aa18.36■□□□□ 0.53
COL18A1-203ENST00000359759 ZPR1O75312 459 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 NSRP1Q9H0G5 558 aaKnown RBP18.35■□□□□ 0.53
COL18A1-203ENST00000359759 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-203ENST00000359759 PSMC4P43686 418 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 IQCGQ9H095 443 aaKnown RBP18.35■□□□□ 0.53
COL18A1-203ENST00000359759 AKR1B10O60218 316 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 ACTN2P35609 894 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 KIF21BO75037 1637 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 OTUD6BQ8N6M0 293 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 SYNCQ9H7C4 482 aa18.35■□□□□ 0.53
COL18A1-203ENST00000359759 CTAGE15A4D2H0 777 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 CTAGE8P0CG41 777 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 CCDC102BQ68D86 513 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 CTAGE6Q86UF2 777 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 CTAGE4Q8IX94 777 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 ARID5AQ03989 594 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 TMOD3Q9NYL9 352 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
COL18A1-203ENST00000359759 UBA7P41226 1012 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-203ENST00000359759 PRIMPOLQ96LW4 560 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 NAP1L3Q99457 506 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-203ENST00000359759 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-203ENST00000359759 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
COL18A1-203ENST00000359759 LRSAM1Q6UWE0 723 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 ARFGAP3Q9NP61 516 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 VPS18Q9P253 973 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 IGSF3O75054 1194 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 SKILP12757 684 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 GPTP24298 496 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.53
COL18A1-203ENST00000359759 IFI16Q16666 785 aaKnown RBP18.33■□□□□ 0.53
COL18A1-203ENST00000359759 GSTA5Q7RTV2 222 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 EVI5LQ96CN4 794 aa18.33■□□□□ 0.53
COL18A1-203ENST00000359759 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
COL18A1-203ENST00000359759 SYKP43405 635 aa18.33■□□□□ 0.52
COL18A1-203ENST00000359759 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.52
COL18A1-203ENST00000359759 ZNF652Q9Y2D9 606 aa18.33■□□□□ 0.52
COL18A1-203ENST00000359759 MCM5P33992 734 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 RAB3IL1Q8TBN0 382 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 UVSSAQ2YD98 709 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 EHBP1Q8NDI1 1231 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 CCDC186Q7Z3E2 898 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 MRVI1Q9Y6F6 885 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 CA8P35219 290 aa18.32■□□□□ 0.52
COL18A1-203ENST00000359759 CFTRP13569 1480 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 CAPN2P17655 700 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 FEZ1Q99689 392 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.31■□□□□ 0.525e-8■■■□□ 15.4
COL18A1-203ENST00000359759 FERMT1Q9BQL6 677 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 CCDC121Q6ZUS5 278 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 ZBTB16Q05516 673 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 CCDC174Q6PII3 467 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
COL18A1-203ENST00000359759 IVLP07476 585 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 STAT6P42226 847 aa18.31■□□□□ 0.52
COL18A1-203ENST00000359759 KANK3Q6NY19 840 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms