RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 MICAL3Q7RTP6 2002 aa7.52□□□□□ -1.2
VPS13B-202ENST00000357162 BICDL2A1A5D9 508 aa7.52□□□□□ -1.2
VPS13B-202ENST00000357162 TTC22Q5TAA0 569 aa7.52□□□□□ -1.2
VPS13B-202ENST00000357162 KIF24Q5T7B8 1368 aa7.52□□□□□ -1.2
VPS13B-202ENST00000357162 TTC41PQ6P2S7 1318 aa7.52□□□□□ -1.2
VPS13B-202ENST00000357162 CCDC69A6NI79 296 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 DUSP27Q5VZP5 1158 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 VCX3BQ9H321 246 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 CENPHQ9H3R5 247 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 WDR78Q5VTH9 848 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 C8orf76Q96K31 380 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 UTP14AQ9BVJ6 771 aaKnown RBP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 CEP250Q9BV73 2442 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 XPCQ01831 940 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 RUFY4Q6ZNE9 571 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 SAFB2Q14151 953 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 PDE6BP35913 854 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 NBPF11Q86T75 865 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 SAMD15Q9P1V8 674 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 CNGA1P29973 690 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 APBA1Q02410 837 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 BRD3Q15059 726 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 CTDP1Q9Y5B0 961 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 CAPN2P17655 700 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 TMEM266Q2M3C6 531 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 MYH9P35579 1960 aaKnown RBP7.52□□□□□ -1.21
VPS13B-202ENST00000357162 PRKAR2BP31323 418 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 WWC2Q6AWC2 1192 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 P3H4Q92791 437 aa7.52□□□□□ -1.21
VPS13B-202ENST00000357162 AMOTQ4VCS5 1084 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 CERS3Q8IU89 383 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 LMNTD2Q8IXW0 634 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 TMPOP42166 694 aaKnown RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 RASSF2P50749 326 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 CACNA2D4Q7Z3S7 1137 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 ERICH4A6NGS2 130 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 G3V3G9 751 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 DCAF8Q5TAQ9 597 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 MYH11P35749 1972 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 KIAA1524Q8TCG1 905 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 LLPHQ9BRT6 129 aaKnown RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 HYPKQ9NX55 129 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 BCAP29Q9UHQ4 241 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 MAGI1Q96QZ7 1491 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 ACTN2P35609 894 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 LACTBP83111 547 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 FOXD4L6Q3SYB3 417 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 FOXD4L3Q6VB84 417 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 VCXQ9H320 206 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 KRT18P05783 430 aaKnown RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 SEC63Q9UGP8 760 aaKnown RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 GNG11P61952 73 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 LRRC45Q96CN5 670 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 IKBKGQ9Y6K9 419 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 TDO2P48775 406 aa7.51□□□□□ -1.21
VPS13B-202ENST00000357162 RBBP5Q15291 538 aaKnown RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 NUP88Q99567 741 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-202ENST00000357162 ZBTB17Q13105 803 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 SLF2Q8IX21 1173 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 LUC7L2Q9Y383 392 aaKnown RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 ZSCAN22P10073 491 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 SETDB1Q15047 1291 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 CNNM2Q9H8M5 875 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 PPIP5K1Q6PFW1 1433 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 EVI5O60447 810 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 SMC6Q96SB8 1091 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 MYCBPQ99417 103 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 ECHDC1Q9NTX5 307 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 STK24Q9Y6E0 443 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 TNNC1P63316 161 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 CCDC174Q6PII3 467 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 DAAM2Q86T65 1068 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 DNAI1Q9UI46 699 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 CTNNBL1Q8WYA6 563 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 PRM3Q9NNZ6 103 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 RUSC2Q8N2Y8 1516 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 URI1O94763 535 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 SOGA3Q5TF21 947 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 CEP63Q96MT8 703 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 TRHP20396 242 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 TBC1D9Q6ZT07 1266 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.5□□□□□ -1.217e-7■■■■■ 168.7
VPS13B-202ENST00000357162 TNIP1Q15025 636 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 AACSQ86V21 672 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 CEP126Q9P2H0 1117 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 MYO1AQ9UBC5 1043 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 TTF2Q9UNY4 1162 aaKnown RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 APOBRQ0VD83 1088 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 NUCKS1Q9H1E3 243 aaKnown RBP7.5□□□□□ -1.21
VPS13B-202ENST00000357162 ASXL3Q9C0F0 2248 aa7.5□□□□□ -1.21
VPS13B-202ENST00000357162 BICDL1Q6ZP65 573 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 FCHSD1Q86WN1 690 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 BRWD1Q9NSI6 2320 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 ARID1AO14497 2285 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms