RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 PTF1AQ7RTS3 328 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 SMARCC1Q92922 1105 aaPredicted RBP13.68□□□□□ -0.22
ABCD4-201ENST00000356924 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
ABCD4-201ENST00000356924 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
ABCD4-201ENST00000356924 PDE1AP54750 535 aa13.67□□□□□ -0.22
ABCD4-201ENST00000356924 HLFQ16534 295 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
ABCD4-201ENST00000356924 RFX5P48382 616 aaPredicted RBP13.66□□□□□ -0.22
ABCD4-201ENST00000356924 FOXO4P98177 505 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
ABCD4-201ENST00000356924 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 CCDC87Q9NVE4 849 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 FRAT2O75474 233 aaPredicted RBP13.66□□□□□ -0.22
ABCD4-201ENST00000356924 EIF5P55010 431 aaKnown RBP13.66□□□□□ -0.22
ABCD4-201ENST00000356924 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
ABCD4-201ENST00000356924 STAP2Q9UGK3 403 aa13.66□□□□□ -0.22
ABCD4-201ENST00000356924 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
ABCD4-201ENST00000356924 MX1P20591 662 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 SEPT12Q8IYM1 358 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
ABCD4-201ENST00000356924 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 SDSP20132 328 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 DZIP3Q86Y13 1208 aaKnown RBP13.64□□□□□ -0.23
ABCD4-201ENST00000356924 NUTM1Q86Y26 1132 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 ZMYND15Q9H091 742 aa13.64□□□□□ -0.23
ABCD4-201ENST00000356924 LY75O60449 1722 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 SASH1O94885 1247 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.63□□□□□ -0.23
ABCD4-201ENST00000356924 BRWD3Q6RI45 1802 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 AOX1Q06278 1338 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 CDC45O75419 566 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
ABCD4-201ENST00000356924 BCORQ6W2J9 1755 aa13.62□□□□□ -0.23
ABCD4-201ENST00000356924 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
ABCD4-201ENST00000356924 OS9Q13438 667 aaPredicted RBP13.62□□□□□ -0.23
ABCD4-201ENST00000356924 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
ABCD4-201ENST00000356924 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
ABCD4-201ENST00000356924 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
ABCD4-201ENST00000356924 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
ABCD4-201ENST00000356924 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
ABCD4-201ENST00000356924 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
ABCD4-201ENST00000356924 USP42Q9H9J4 1324 aaKnown RBP13.62□□□□□ -0.23
ABCD4-201ENST00000356924 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
ABCD4-201ENST00000356924 GPTP24298 496 aa13.61□□□□□ -0.23
ABCD4-201ENST00000356924 ZNF34Q8IZ26 560 aa13.61□□□□□ -0.23
ABCD4-201ENST00000356924 ZBTB38Q8NAP3 1195 aaPredicted RBP13.61□□□□□ -0.23
ABCD4-201ENST00000356924 SIL1Q9H173 461 aa13.61□□□□□ -0.23
ABCD4-201ENST00000356924 KCNQ4P56696 695 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 PI4K2BQ8TCG2 481 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 PLA2G12BQ9BX93 195 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
ABCD4-201ENST00000356924 UBN2Q6ZU65 1347 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
ABCD4-201ENST00000356924 CNTNAP4Q9C0A0 1308 aa13.59□□□□□ -0.23
ABCD4-201ENST00000356924 SYNE4Q8N205 404 aa13.59□□□□□ -0.23
ABCD4-201ENST00000356924 CLASRPQ8N2M8 674 aaKnown RBP13.59□□□□□ -0.23
ABCD4-201ENST00000356924 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
ABCD4-201ENST00000356924 MYH3P11055 1940 aa13.58□□□□□ -0.24
ABCD4-201ENST00000356924 HSP90AA2PQ14568 343 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-201ENST00000356924 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-201ENST00000356924 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
ABCD4-201ENST00000356924 RRAGDQ9NQL2 400 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-201ENST00000356924 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
ABCD4-201ENST00000356924 CSF1RP07333 972 aa13.57□□□□□ -0.24
ABCD4-201ENST00000356924 L1TD1Q5T7N2 865 aaKnown RBP13.57□□□□□ -0.24
ABCD4-201ENST00000356924 TTC41PQ6P2S7 1318 aa13.57□□□□□ -0.24
ABCD4-201ENST00000356924 SCN7AQ01118 1682 aa13.57□□□□□ -0.24
ABCD4-201ENST00000356924 AACSQ86V21 672 aa13.57□□□□□ -0.24
ABCD4-201ENST00000356924 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
ABCD4-201ENST00000356924 RC3H1Q5TC82 1133 aaKnown RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 ATG9AQ7Z3C6 839 aa13.56□□□□□ -0.24
ABCD4-201ENST00000356924 NAP1L5Q96NT1 182 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 TFCP2Q12800 502 aa13.56□□□□□ -0.24
ABCD4-201ENST00000356924 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
ABCD4-201ENST00000356924 DDX60Q8IY21 1712 aaKnown RBP13.55□□□□□ -0.24
ABCD4-201ENST00000356924 RRP9O43818 475 aaKnown RBP13.55□□□□□ -0.24
ABCD4-201ENST00000356924 SUSD4Q5VX71 490 aa13.55□□□□□ -0.24
ABCD4-201ENST00000356924 ZNF594Q96JF6 807 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-201ENST00000356924 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-201ENST00000356924 LAMB2P55268 1798 aa13.55□□□□□ -0.24
ABCD4-201ENST00000356924 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
ABCD4-201ENST00000356924 ECHDC1Q9NTX5 307 aa13.55□□□□□ -0.24
ABCD4-201ENST00000356924 TRMT112Q9UI30 125 aaKnown RBP13.55□□□□□ -0.24
ABCD4-201ENST00000356924 C4BP0C0L5 1744 aa13.55□□□□□ -0.24
ABCD4-201ENST00000356924 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms