RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ANAPC4Q9UJX5 808 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 SREK1Q8WXA9 508 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 ERBINQ96RT1 1412 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 ESCO1Q5FWF5 840 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 FAM114A1Q8IWE2 563 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 PTGS1P23219 599 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 ZNF165P49910 485 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 LIMCH1Q9UPQ0 1083 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 PABPN1LA6NDY0 278 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 STX6O43752 255 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 METTL24Q5JXM2 366 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-201ENST00000356183 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 GOLGA1Q92805 767 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 IFI16Q16666 785 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 SMC6Q96SB8 1091 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 SYCP3Q8IZU3 236 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 RASAL2Q9UJF2 1139 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 DHX29Q7Z478 1369 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 MIPOL1Q8TD10 442 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 EHBP1Q8NDI1 1231 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 PHACTR2O75167 634 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 DUSP27Q5VZP5 1158 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 SELENOOQ9BVL4 669 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 NAPBQ9H115 298 aa12.62□□□□□ -0.39
GTF3C1-201ENST00000356183 CTAGE9A4FU28 777 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 ZNF213O14771 459 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 SKILP12757 684 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 UBE2HP62256 183 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 MAP7D1Q3KQU3 841 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 GSTA5Q7RTV2 222 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 CEP120Q8N960 986 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 A0A087WZG4 1122 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 GJC1P36383 396 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 IGHDP01880 384 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 RHOXF2BP0C7M4 288 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 CUL5Q93034 780 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 RAB34Q9BZG1 259 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 CNPY2Q9Y2B0 182 aa12.61□□□□□ -0.39
GTF3C1-201ENST00000356183 EBAG9O00559 213 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 IGHMBP2P38935 993 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 SEPT14Q6ZU15 432 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 KCNK9Q9NPC2 374 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 SSX2IPQ9Y2D8 614 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 N4BP3O15049 544 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 TBC1D5Q92609 795 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■□□ 19
GTF3C1-201ENST00000356183 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 IFIT3O14879 490 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 AFMP43652 599 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 RASSF4Q9H2L5 321 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 AMPD3Q01432 767 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 EXOC1Q9NV70 894 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 VGLL3A8MV65 326 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 KIF20AO95235 890 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
GTF3C1-201ENST00000356183 KIF3CO14782 793 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 CETN1Q12798 172 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 CRACR2BQ8N4Y2 399 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 CCDC196A0A1B0GTZ2 297 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 IDEP14735 1019 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 SARNPP82979 210 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 STMN4Q9H169 189 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 NAIPQ13075 1403 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 RRAGBQ5VZM2 374 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 CDK19Q9BWU1 502 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 A0A1B0GUL7 405 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 ACTN2P35609 894 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
GTF3C1-201ENST00000356183 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms