RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 AK9Q5TCS8 1911 aa31.44■■■□□ 2.62
CLK2-201ENST00000355560 PTPN12Q05209 780 aaKnown RBP31.44■■■□□ 2.62
CLK2-201ENST00000355560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.44■■■□□ 2.62
CLK2-201ENST00000355560 ERC2O15083 957 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 REC8O95072 547 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 KIF2CQ99661 725 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 MYT1Q01538 1121 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 TRIM28Q13263 835 aaKnown RBP31.42■■■□□ 2.62
CLK2-201ENST00000355560 GIGYF2Q6Y7W6 1299 aaKnown RBP31.42■■■□□ 2.62
CLK2-201ENST00000355560 GPATCH3Q96I76 525 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 USP26Q9BXU7 913 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 CHMP3Q9Y3E7 222 aa31.42■■■□□ 2.62
CLK2-201ENST00000355560 LOC102724428A0A0B4J2F2 783 aa31.41■■■□□ 2.62
CLK2-201ENST00000355560 ATP6V1AP38606 617 aa31.41■■■□□ 2.62
CLK2-201ENST00000355560 IL6STP40189 918 aaPredicted RBP31.41■■■□□ 2.62
CLK2-201ENST00000355560 SIK1P57059 783 aa31.41■■■□□ 2.62
CLK2-201ENST00000355560 PALLDQ8WX93 1383 aa31.41■■■□□ 2.62
CLK2-201ENST00000355560 GLRX3O76003 335 aaKnown RBP31.4■■■□□ 2.62
CLK2-201ENST00000355560 MAP4K4O95819 1239 aaPredicted RBP31.4■■■□□ 2.62
CLK2-201ENST00000355560 EAF2Q96CJ1 260 aaPredicted RBP31.4■■■□□ 2.62
CLK2-201ENST00000355560 ECHDC1Q9NTX5 307 aa31.4■■■□□ 2.62
CLK2-201ENST00000355560 KCNQ2O43526 872 aa31.4■■■□□ 2.62
CLK2-201ENST00000355560 CHMLP26374 656 aa31.4■■■□□ 2.62
CLK2-201ENST00000355560 HLFQ16534 295 aa31.39■■■□□ 2.62
CLK2-201ENST00000355560 CICQ96RK0 1608 aaPredicted RBP31.38■■■□□ 2.61
CLK2-201ENST00000355560 ANKRD36CQ5JPF3 1778 aa31.38■■■□□ 2.61
CLK2-201ENST00000355560 HSPA1LP34931 641 aa31.37■■■□□ 2.61
CLK2-201ENST00000355560 CNTROBQ8N137 903 aa31.37■■■□□ 2.61
CLK2-201ENST00000355560 ESYT1Q9BSJ8 1104 aa31.37■■■□□ 2.61
CLK2-201ENST00000355560 HSP90AB3PQ58FF7 597 aa31.37■■■□□ 2.61
CLK2-201ENST00000355560 MEX3CQ5U5Q3 659 aaKnown RBP31.36■■■□□ 2.61
CLK2-201ENST00000355560 DZIP3Q86Y13 1208 aaKnown RBP31.36■■■□□ 2.61
CLK2-201ENST00000355560 CCDC8Q9H0W5 538 aaPredicted RBP31.36■■■□□ 2.61
CLK2-201ENST00000355560 SMARCC1Q92922 1105 aaPredicted RBP31.36■■■□□ 2.61
CLK2-201ENST00000355560 CCDC87Q9NVE4 849 aa31.36■■■□□ 2.61
CLK2-201ENST00000355560 NUP98P52948 1817 aa31.35■■■□□ 2.61
CLK2-201ENST00000355560 CRKLP46109 303 aaKnown RBP31.35■■■□□ 2.61
CLK2-201ENST00000355560 THSD7AQ9UPZ6 1657 aa31.34■■■□□ 2.61
CLK2-201ENST00000355560 PCCAP05165 728 aaPredicted RBP31.34■■■□□ 2.61
CLK2-201ENST00000355560 GPTP24298 496 aa31.34■■■□□ 2.61
CLK2-201ENST00000355560 ITPK1Q13572 414 aa31.34■■■□□ 2.61
CLK2-201ENST00000355560 INTS5Q6P9B9 1019 aaKnown RBP31.34■■■□□ 2.61
CLK2-201ENST00000355560 TLR7Q9NYK1 1049 aaKnown RBP31.34■■■□□ 2.61
CLK2-201ENST00000355560 TBC1D2BQ9UPU7 963 aa31.34■■■□□ 2.61
CLK2-201ENST00000355560 HSCBQ8IWL3 235 aa31.34■■■□□ 2.61
CLK2-201ENST00000355560 ZBTB38Q8NAP3 1195 aaPredicted RBP31.33■■■□□ 2.61
CLK2-201ENST00000355560 FAM89AQ96GI7 184 aa31.33■■■□□ 2.61
CLK2-201ENST00000355560 RREB1Q92766 1687 aa31.33■■■□□ 2.61
CLK2-201ENST00000355560 ERVV-1B6SEH8 477 aa31.32■■■□□ 2.6
CLK2-201ENST00000355560 EIF5P55010 431 aaKnown RBP31.32■■■□□ 2.6
CLK2-201ENST00000355560 TFCP2Q12800 502 aa31.32■■■□□ 2.6
CLK2-201ENST00000355560 NLRP10Q86W26 655 aa31.32■■■□□ 2.6
CLK2-201ENST00000355560 SNX21Q969T3 373 aa31.31■■■□□ 2.6
CLK2-201ENST00000355560 NBR1Q14596 966 aa31.31■■■□□ 2.6
CLK2-201ENST00000355560 MYH14Q7Z406 1995 aaKnown RBP31.3■■■□□ 2.6
CLK2-201ENST00000355560 TNNI3KQ59H18 835 aa31.3■■■□□ 2.6
CLK2-201ENST00000355560 FPGT-TNNI3KV9GXZ4 949 aa31.3■■■□□ 2.6
CLK2-201ENST00000355560 PLA2G12BQ9BX93 195 aa31.28■■■□□ 2.6
CLK2-201ENST00000355560 SLKQ9H2G2 1235 aaPredicted RBP31.28■■■□□ 2.6
CLK2-201ENST00000355560 COL5A3P25940 1745 aaPredicted RBP31.28■■■□□ 2.6
CLK2-201ENST00000355560 ANO2Q9NQ90 1003 aa31.27■■■□□ 2.6
CLK2-201ENST00000355560 CDHR2Q9BYE9 1310 aa31.27■■■□□ 2.6
CLK2-201ENST00000355560 AFF2P51816 1311 aa31.26■■■□□ 2.6
CLK2-201ENST00000355560 ZNF831Q5JPB2 1677 aa31.26■■■□□ 2.6
CLK2-201ENST00000355560 ATG9AQ7Z3C6 839 aa31.26■■■□□ 2.59
CLK2-201ENST00000355560 IL25Q9H293 177 aa31.26■■■□□ 2.59
CLK2-201ENST00000355560 ZNF594Q96JF6 807 aaPredicted RBP31.25■■■□□ 2.59
CLK2-201ENST00000355560 GJD4Q96KN9 370 aaPredicted RBP31.25■■■□□ 2.59
CLK2-201ENST00000355560 DBNLQ9UJU6 430 aaKnown RBP31.25■■■□□ 2.59
CLK2-201ENST00000355560 RABEP1Q15276 862 aa31.25■■■□□ 2.59
CLK2-201ENST00000355560 CCDC57Q2TAC2 916 aa31.25■■■□□ 2.59
CLK2-201ENST00000355560 SYNE4Q8N205 404 aa31.25■■■□□ 2.59
CLK2-201ENST00000355560 EVI5LQ96CN4 794 aa31.24■■■□□ 2.59
CLK2-201ENST00000355560 IL15P40933 162 aaPredicted RBP31.24■■■□□ 2.59
CLK2-201ENST00000355560 UBN2Q6ZU65 1347 aa31.24■■■□□ 2.59
CLK2-201ENST00000355560 EYA2O00167 538 aa31.23■■■□□ 2.59
CLK2-201ENST00000355560 CD2BP2O95400 341 aaKnown RBP31.23■■■□□ 2.59
CLK2-201ENST00000355560 SPRYD3Q8NCJ5 442 aa31.23■■■□□ 2.59
CLK2-201ENST00000355560 TRMT112Q9UI30 125 aaKnown RBP31.23■■■□□ 2.59
CLK2-201ENST00000355560 PTF1AQ7RTS3 328 aa31.22■■■□□ 2.59
CLK2-201ENST00000355560 ZNF34Q8IZ26 560 aa31.22■■■□□ 2.59
CLK2-201ENST00000355560 BOLA2Q9H3K6 86 aa31.22■■■□□ 2.59
CLK2-201ENST00000355560 LRRC24Q50LG9 513 aa31.22■■■□□ 2.59
CLK2-201ENST00000355560 CCDC85AQ96PX6 553 aaPredicted RBP31.22■■■□□ 2.59
CLK2-201ENST00000355560 CIAO1O76071 339 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 CSF1RP07333 972 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 MYH3P11055 1940 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 NHSQ6T4R5 1651 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 BTAF1O14981 1849 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 SGSM2O43147 1006 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 CWC27Q6UX04 472 aaKnown RBP31.21■■■□□ 2.59
CLK2-201ENST00000355560 ANTXR1Q9H6X2 564 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 DIAPH3Q9NSV4 1193 aa31.21■■■□□ 2.59
CLK2-201ENST00000355560 FAM182BQ5T319 152 aa31.2■■■□□ 2.59
CLK2-201ENST00000355560 DBNDD2Q9BQY9 259 aa31.19■■■□□ 2.58
CLK2-201ENST00000355560 IRS4O14654 1257 aaPredicted RBP31.19■■■□□ 2.58
CLK2-201ENST00000355560 CAMTA2O94983 1202 aa31.19■■■□□ 2.58
CLK2-201ENST00000355560 MCCP23508 829 aa31.19■■■□□ 2.58
CLK2-201ENST00000355560 LINC00116Q8NCU8 138 aa31.19■■■□□ 2.58
CLK2-201ENST00000355560 IFIT5Q13325 482 aaKnown RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms