RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
SNU13-202ENST00000355257 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
SNU13-202ENST00000355257 PIM2Q9P1W9 311 aa13.76□□□□□ -0.21
SNU13-202ENST00000355257 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
SNU13-202ENST00000355257 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
SNU13-202ENST00000355257 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
SNU13-202ENST00000355257 DCTPP1Q9H773 170 aa13.75□□□□□ -0.21
SNU13-202ENST00000355257 CARMIL3Q8ND23 1372 aa13.75□□□□□ -0.21
SNU13-202ENST00000355257 KDM3BQ7LBC6 1761 aa13.75□□□□□ -0.21
SNU13-202ENST00000355257 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
SNU13-202ENST00000355257 KRT24Q2M2I5 525 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 ARHGAP27Q6ZUM4 889 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 ANKRD44Q8N8A2 993 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 TSPYL4Q9UJ04 414 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 STARD3NLO95772 234 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 SERPINB2P05120 415 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
SNU13-202ENST00000355257 DALRD3Q5D0E6 543 aaKnown RBP13.74□□□□□ -0.21
SNU13-202ENST00000355257 ANKRD45Q5TZF3 282 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 CACNA1SQ13698 1873 aa13.74□□□□□ -0.21
SNU13-202ENST00000355257 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
SNU13-202ENST00000355257 FER1L6Q2WGJ9 1857 aa13.73□□□□□ -0.21
SNU13-202ENST00000355257 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
SNU13-202ENST00000355257 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
SNU13-202ENST00000355257 C1orf115Q9H7X2 142 aa13.73□□□□□ -0.21
SNU13-202ENST00000355257 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
SNU13-202ENST00000355257 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
SNU13-202ENST00000355257 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
SNU13-202ENST00000355257 EIF5BO60841 1220 aaKnown RBP13.72□□□□□ -0.21
SNU13-202ENST00000355257 IL6STP40189 918 aaPredicted RBP13.72□□□□□ -0.21
SNU13-202ENST00000355257 TBC1D2Q9BYX2 928 aa13.72□□□□□ -0.21
SNU13-202ENST00000355257 ANTXR1Q9H6X2 564 aa13.72□□□□□ -0.21
SNU13-202ENST00000355257 A0A087WZG4 1122 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 BTBD11A6QL63 1104 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 A1BGP04217 495 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 TBC1D9BQ66K14 1250 aa13.71□□□□□ -0.21
SNU13-202ENST00000355257 CCT4P50991 539 aaKnown RBP13.7□□□□□ -0.22
SNU13-202ENST00000355257 PRELPP51888 382 aa13.7□□□□□ -0.22
SNU13-202ENST00000355257 CEP85Q6P2H3 762 aa13.7□□□□□ -0.22
SNU13-202ENST00000355257 TBC1D2BQ9UPU7 963 aa13.7□□□□□ -0.22
SNU13-202ENST00000355257 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
SNU13-202ENST00000355257 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 HSPA6P17066 643 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 MFAP1P55081 439 aaKnown RBP13.69□□□□□ -0.22
SNU13-202ENST00000355257 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
SNU13-202ENST00000355257 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 SNX21Q969T3 373 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
SNU13-202ENST00000355257 NUP98P52948 1817 aa13.68□□□□□ -0.22
SNU13-202ENST00000355257 CCDC30Q5VVM6 783 aa13.68□□□□□ -0.22
SNU13-202ENST00000355257 PRR5LQ6MZQ0 368 aa13.68□□□□□ -0.22
SNU13-202ENST00000355257 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
SNU13-202ENST00000355257 PIP4K2AP48426 406 aaPredicted RBP13.67□□□□□ -0.22
SNU13-202ENST00000355257 RASSF7Q02833 373 aa13.67□□□□□ -0.22
SNU13-202ENST00000355257 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
SNU13-202ENST00000355257 RNF181Q9P0P0 153 aa13.67□□□□□ -0.22
SNU13-202ENST00000355257 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
SNU13-202ENST00000355257 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
SNU13-202ENST00000355257 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
SNU13-202ENST00000355257 TOMM70O94826 608 aa13.66□□□□□ -0.22
SNU13-202ENST00000355257 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
SNU13-202ENST00000355257 G2E3Q7L622 706 aa13.66□□□□□ -0.22
SNU13-202ENST00000355257 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
SNU13-202ENST00000355257 MEIS3Q99687 375 aa13.66□□□□□ -0.22
SNU13-202ENST00000355257 STK31Q9BXU1 1019 aa13.66□□□□□ -0.22
SNU13-202ENST00000355257 NFKBIEO00221 500 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 HMMRO75330 724 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 HOXB7P09629 217 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
SNU13-202ENST00000355257 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
SNU13-202ENST00000355257 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 TTLL6Q8N841 843 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 BRIP1Q9BX63 1249 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
SNU13-202ENST00000355257 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
SNU13-202ENST00000355257 H0YIN7 160 aa13.64□□□□□ -0.23
SNU13-202ENST00000355257 CDC45O75419 566 aa13.64□□□□□ -0.23
SNU13-202ENST00000355257 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
SNU13-202ENST00000355257 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
SNU13-202ENST00000355257 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
SNU13-202ENST00000355257 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
SNU13-202ENST00000355257 FLIIQ13045 1269 aa13.64□□□□□ -0.23
SNU13-202ENST00000355257 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
SNU13-202ENST00000355257 OSBPL3Q9H4L5 887 aa13.64□□□□□ -0.23
SNU13-202ENST00000355257 GNAI2P04899 355 aa13.63□□□□□ -0.23
SNU13-202ENST00000355257 GNAI3P08754 354 aa13.63□□□□□ -0.23
SNU13-202ENST00000355257 PDE6BP35913 854 aa13.63□□□□□ -0.23
SNU13-202ENST00000355257 KIF2CQ99661 725 aa13.63□□□□□ -0.23
SNU13-202ENST00000355257 RGL2O15211 777 aa13.62□□□□□ -0.23
SNU13-202ENST00000355257 LMNB1P20700 586 aa13.62□□□□□ -0.23
SNU13-202ENST00000355257 GSE1Q14687 1217 aa13.62□□□□□ -0.23
SNU13-202ENST00000355257 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
SNU13-202ENST00000355257 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
SNU13-202ENST00000355257 SETDB2Q96T68 719 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms