RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 OS9Q13438 667 aaPredicted RBP25.4■■□□□ 1.66
TRIM4-202ENST00000354241 RXRBP28702 533 aa25.39■■□□□ 1.66
TRIM4-202ENST00000354241 NOP58Q9Y2X3 529 aaKnown RBP25.39■■□□□ 1.66
TRIM4-202ENST00000354241 RABL6Q3YEC7 729 aaPredicted RBP25.39■■□□□ 1.65
TRIM4-202ENST00000354241 NLRP10Q86W26 655 aa25.39■■□□□ 1.65
TRIM4-202ENST00000354241 TRIM37O94972 964 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 CAMTA2O94983 1202 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
TRIM4-202ENST00000354241 FOXO4P98177 505 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 RHPN1Q8TCX5 695 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 KIF1BPQ96EK5 621 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 BCORQ6W2J9 1755 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 RC3H1Q5TC82 1133 aaKnown RBP25.37■■□□□ 1.65
TRIM4-202ENST00000354241 LMBR1LQ6UX01 489 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 IL1RAPL2Q9NP60 686 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 ZBTB38Q8NAP3 1195 aaPredicted RBP25.36■■□□□ 1.65
TRIM4-202ENST00000354241 FAM89AQ96GI7 184 aa25.36■■□□□ 1.65
TRIM4-202ENST00000354241 CHMP3Q9Y3E7 222 aa25.36■■□□□ 1.65
TRIM4-202ENST00000354241 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
TRIM4-202ENST00000354241 ZNF34Q8IZ26 560 aa25.35■■□□□ 1.65
TRIM4-202ENST00000354241 G3BP1Q13283 466 aaKnown RBP eCLIP25.34■■□□□ 1.65
TRIM4-202ENST00000354241 KLHDC4Q8TBB5 520 aa25.34■■□□□ 1.65
TRIM4-202ENST00000354241 GNPATO15228 680 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 UBN2Q6ZU65 1347 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 ERC1Q8IUD2 1116 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 SIL1Q9H173 461 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 C4BP0C0L5 1744 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 RPS6KA4O75676 772 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 RFX5P48382 616 aaPredicted RBP25.32■■□□□ 1.64
TRIM4-202ENST00000354241 TTC22Q5TAA0 569 aa25.32■■□□□ 1.64
TRIM4-202ENST00000354241 RGS17Q9UGC6 210 aaPredicted RBP25.32■■□□□ 1.64
TRIM4-202ENST00000354241 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
TRIM4-202ENST00000354241 ZNF652Q9Y2D9 606 aa25.32■■□□□ 1.64
TRIM4-202ENST00000354241 SMIM5Q71RC9 77 aa25.31■■□□□ 1.64
TRIM4-202ENST00000354241 CDHR2Q9BYE9 1310 aa25.31■■□□□ 1.64
TRIM4-202ENST00000354241 PDE1AP54750 535 aa25.31■■□□□ 1.64
TRIM4-202ENST00000354241 GSPT1P15170 499 aaKnown RBP25.3■■□□□ 1.64
TRIM4-202ENST00000354241 SYNE4Q8N205 404 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 COPRSQ9NQ92 184 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 RTCBQ9Y3I0 505 aaKnown RBP25.3■■□□□ 1.64
TRIM4-202ENST00000354241 SCN7AQ01118 1682 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 SALL3Q9BXA9 1300 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 MX1P20591 662 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 PTPN12Q05209 780 aaKnown RBP25.29■■□□□ 1.64
TRIM4-202ENST00000354241 NUTM1Q86Y26 1132 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 LRRC4BQ9NT99 713 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 MYH3P11055 1940 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 PLA2G12BQ9BX93 195 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 OSBPL3Q9H4L5 887 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 NIP7Q9Y221 180 aaKnown RBP eCLIP25.29■■□□□ 1.64
TRIM4-202ENST00000354241 POTEAQ6S8J7 498 aa25.28■■□□□ 1.64
TRIM4-202ENST00000354241 AK7Q96M32 723 aa25.28■■□□□ 1.64
TRIM4-202ENST00000354241 FAM177BA6PVY3 158 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 SASH1O94885 1247 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 PARP10Q53GL7 1025 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 SUSD4Q5VX71 490 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 CLASRPQ8N2M8 674 aaKnown RBP25.27■■□□□ 1.64
TRIM4-202ENST00000354241 IRS4O14654 1257 aaPredicted RBP25.27■■□□□ 1.64
TRIM4-202ENST00000354241 TSHZ3Q63HK5 1081 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 SLC27A3Q5K4L6 730 aa25.26■■□□□ 1.63
TRIM4-202ENST00000354241 CLEC4GQ6UXB4 293 aa25.26■■□□□ 1.63
TRIM4-202ENST00000354241 SEC24BO95487 1268 aa25.25■■□□□ 1.63
TRIM4-202ENST00000354241 UTP14AQ9BVJ6 771 aaKnown RBP25.25■■□□□ 1.63
TRIM4-202ENST00000354241 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
TRIM4-202ENST00000354241 STAP2Q9UGK3 403 aa25.25■■□□□ 1.63
TRIM4-202ENST00000354241 NARFQ9UHQ1 456 aa25.25■■□□□ 1.63
TRIM4-202ENST00000354241 PHF14O94880 888 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 USPL1Q5W0Q7 1092 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 AMIGO3Q86WK7 504 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 SRP68Q9UHB9 627 aaKnown RBP25.24■■□□□ 1.63
TRIM4-202ENST00000354241 EP400Q96L91 3159 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 C4AP0C0L4 1744 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 ZPR1O75312 459 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 CCDC57Q2TAC2 916 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 SH3TC1Q8TE82 1336 aa25.23■■□□□ 1.63
TRIM4-202ENST00000354241 CSF1RP07333 972 aa25.23■■□□□ 1.63
TRIM4-202ENST00000354241 CTSWP56202 376 aa25.23■■□□□ 1.63
TRIM4-202ENST00000354241 ARHGEF1Q92888 912 aaKnown RBP25.23■■□□□ 1.63
TRIM4-202ENST00000354241 TUBGCP6Q96RT7 1819 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 PDE8AO60658 829 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 IFIT2P09913 472 aaKnown RBP25.22■■□□□ 1.63
TRIM4-202ENST00000354241 AACSQ86V21 672 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 ZNF594Q96JF6 807 aaPredicted RBP25.22■■□□□ 1.63
TRIM4-202ENST00000354241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.22■■□□□ 1.63
TRIM4-202ENST00000354241 AOX1Q06278 1338 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 RGL2O15211 777 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 UBR3Q6ZT12 1888 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 NTSR2O95665 410 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 SDSP20132 328 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 DDX60Q8IY21 1712 aaKnown RBP25.2■■□□□ 1.63
TRIM4-202ENST00000354241 CDC45O75419 566 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 APBA3O96018 575 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 TFCP2Q12800 502 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 TXNRD1Q16881 649 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 BICDL1Q6ZP65 573 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 TTLL11Q8NHH1 800 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 RFC4P35249 363 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 IFIT5Q13325 482 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms