RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
SVIP-201ENST00000354193 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
SVIP-201ENST00000354193 CCDC87Q9NVE4 849 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 WWC3Q9ULE0 1092 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
SVIP-201ENST00000354193 FOSBP53539 338 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 CCDC158Q5M9N0 1113 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 CPA1P15085 419 aa13.41□□□□□ -0.26
SVIP-201ENST00000354193 ZKSCAN1P17029 563 aaPredicted RBP13.41□□□□□ -0.26
SVIP-201ENST00000354193 RGS12O14924 1447 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 KDM4AO75164 1064 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 IBTKQ9P2D0 1353 aaPredicted RBP13.4□□□□□ -0.26
SVIP-201ENST00000354193 TAF5LO75529 589 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 SASH1O94885 1247 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 CHMLP26374 656 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 ESYT1Q9BSJ8 1104 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 AFF2P51816 1311 aa13.4□□□□□ -0.26
SVIP-201ENST00000354193 AK7Q96M32 723 aa13.4□□□□□ -0.27
SVIP-201ENST00000354193 CDCA7Q9BWT1 371 aaPredicted RBP13.4□□□□□ -0.27
SVIP-201ENST00000354193 ABCF2Q9UG63 623 aa13.4□□□□□ -0.27
SVIP-201ENST00000354193 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 FAM227BQ96M60 508 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 ITGA6P23229 1130 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 RGPD2P0DJD1 1756 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 RFC4P35249 363 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 JAG2Q9Y219 1238 aa13.39□□□□□ -0.27
SVIP-201ENST00000354193 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 STK3Q13188 491 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 TRIM37O94972 964 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 JAKMIP1Q96N16 626 aaKnown RBP13.38□□□□□ -0.27
SVIP-201ENST00000354193 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
SVIP-201ENST00000354193 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
SVIP-201ENST00000354193 ZNF652Q9Y2D9 606 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 SLFNL1Q499Z3 407 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 FBXW7Q969H0 707 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 GREM2Q9H772 168 aa13.38□□□□□ -0.27
SVIP-201ENST00000354193 SRP68Q9UHB9 627 aaKnown RBP13.38□□□□□ -0.27
SVIP-201ENST00000354193 A0A1B0GUL7 405 aa13.37□□□□□ -0.27
SVIP-201ENST00000354193 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 RABEP1Q15276 862 aa13.37□□□□□ -0.27
SVIP-201ENST00000354193 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
SVIP-201ENST00000354193 TNNI3KQ59H18 835 aa13.37□□□□□ -0.27
SVIP-201ENST00000354193 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 FPGT-TNNI3KV9GXZ4 949 aa13.37□□□□□ -0.27
SVIP-201ENST00000354193 GOLGA6L22H0YM25 854 aa13.37□□□□□ -0.27
SVIP-201ENST00000354193 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 CYP19A1P11511 503 aaPredicted RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
SVIP-201ENST00000354193 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 MAP3K15Q6ZN16 1313 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 USP26Q9BXU7 913 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 CHGBP05060 677 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 RTCBQ9Y3I0 505 aaKnown RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 EYA2O00167 538 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 ATP2B3Q16720 1220 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
SVIP-201ENST00000354193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 DBNLQ9UJU6 430 aaKnown RBP13.36□□□□□ -0.27
SVIP-201ENST00000354193 HAND2P61296 217 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 POLA2Q14181 598 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 SEC62Q99442 399 aaKnown RBP13.35□□□□□ -0.27
SVIP-201ENST00000354193 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 SH3TC1Q8TE82 1336 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
SVIP-201ENST00000354193 ITPK1Q13572 414 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 PI16Q6UXB8 463 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
SVIP-201ENST00000354193 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 SLIT3O75094 1523 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 ADORA1P30542 326 aa13.34□□□□□ -0.27
SVIP-201ENST00000354193 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
SVIP-201ENST00000354193 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms