RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
MBD1-205ENST00000353909 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
MBD1-205ENST00000353909 CYP2E1P05181 493 aaPredicted RBP18.85■□□□□ 0.61
MBD1-205ENST00000353909 FOXO4P98177 505 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 DBNLQ9UJU6 430 aaKnown RBP18.85■□□□□ 0.61
MBD1-205ENST00000353909 CHMP3Q9Y3E7 222 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 TNS2Q63HR2 1409 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 H7C1W4 665 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 CPA1P15085 419 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
MBD1-205ENST00000353909 PAPPAQ13219 1627 aa18.85■□□□□ 0.61
MBD1-205ENST00000353909 BAG4O95429 457 aaKnown RBP18.84■□□□□ 0.61
MBD1-205ENST00000353909 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
MBD1-205ENST00000353909 DNAJC10Q8IXB1 793 aa18.84■□□□□ 0.61
MBD1-205ENST00000353909 IL17RAQ96F46 866 aa18.84■□□□□ 0.61
MBD1-205ENST00000353909 FOXD4L5Q5VV16 416 aaPredicted RBP18.83■□□□□ 0.61
MBD1-205ENST00000353909 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.61
MBD1-205ENST00000353909 FOXD4L4Q8WXT5 416 aaPredicted RBP18.83■□□□□ 0.61
MBD1-205ENST00000353909 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.61
MBD1-205ENST00000353909 CHGBP05060 677 aa18.83■□□□□ 0.6
MBD1-205ENST00000353909 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.6
MBD1-205ENST00000353909 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
MBD1-205ENST00000353909 TNNI3KQ59H18 835 aa18.82■□□□□ 0.6
MBD1-205ENST00000353909 FPGT-TNNI3KV9GXZ4 949 aa18.82■□□□□ 0.6
MBD1-205ENST00000353909 NUP188Q5SRE5 1749 aa18.82■□□□□ 0.6
MBD1-205ENST00000353909 ATG3Q9NT62 314 aa18.82■□□□□ 0.6
MBD1-205ENST00000353909 CWC22Q9HCG8 908 aaKnown RBP18.82■□□□□ 0.6
MBD1-205ENST00000353909 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
MBD1-205ENST00000353909 NUCB2P80303 420 aa18.81■□□□□ 0.6
MBD1-205ENST00000353909 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
MBD1-205ENST00000353909 DBNDD2Q9BQY9 259 aa18.81■□□□□ 0.6
MBD1-205ENST00000353909 ADCK5Q3MIX3 580 aa18.81■□□□□ 0.6
MBD1-205ENST00000353909 ZNF594Q96JF6 807 aaPredicted RBP18.81■□□□□ 0.6
MBD1-205ENST00000353909 COL15A1P39059 1388 aa18.8■□□□□ 0.6
MBD1-205ENST00000353909 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
MBD1-205ENST00000353909 CUL4AQ13619 759 aa18.8■□□□□ 0.6
MBD1-205ENST00000353909 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
MBD1-205ENST00000353909 CLEC17AQ6ZS10 378 aa18.8■□□□□ 0.6
MBD1-205ENST00000353909 FSD1Q9BTV5 496 aa18.8■□□□□ 0.6
MBD1-205ENST00000353909 DTNBO60941 627 aa18.8■□□□□ 0.6
MBD1-205ENST00000353909 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
MBD1-205ENST00000353909 TJP1Q07157 1748 aa18.79■□□□□ 0.6
MBD1-205ENST00000353909 MCM2P49736 904 aa18.79■□□□□ 0.6
MBD1-205ENST00000353909 MCTP1Q6DN14 999 aa18.79■□□□□ 0.6
MBD1-205ENST00000353909 RUFY2Q8WXA3 655 aa18.79■□□□□ 0.6
MBD1-205ENST00000353909 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
MBD1-205ENST00000353909 ATG9AQ7Z3C6 839 aa18.79■□□□□ 0.6
MBD1-205ENST00000353909 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
MBD1-205ENST00000353909 TTC14Q96N46 770 aa18.78■□□□□ 0.6
MBD1-205ENST00000353909 LRRC24Q50LG9 513 aa18.78■□□□□ 0.6
MBD1-205ENST00000353909 CCDC191Q8NCU4 936 aa18.78■□□□□ 0.6
MBD1-205ENST00000353909 AK2P54819 239 aa18.78■□□□□ 0.6
MBD1-205ENST00000353909 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
MBD1-205ENST00000353909 CCDC85AQ96PX6 553 aaPredicted RBP18.78■□□□□ 0.6
MBD1-205ENST00000353909 CCDC171Q6TFL3 1326 aa18.77■□□□□ 0.6
MBD1-205ENST00000353909 ITGB4P16144 1822 aa18.77■□□□□ 0.6
MBD1-205ENST00000353909 CASTP20810 708 aaKnown RBP18.77■□□□□ 0.6
MBD1-205ENST00000353909 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
MBD1-205ENST00000353909 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
MBD1-205ENST00000353909 ADAMTS2O95450 1211 aa18.77■□□□□ 0.59
MBD1-205ENST00000353909 TIMM10P62072 90 aa18.77■□□□□ 0.59
MBD1-205ENST00000353909 NECTIN1Q15223 517 aa18.77■□□□□ 0.59
MBD1-205ENST00000353909 PUS3Q9BZE2 481 aaKnown RBP18.77■□□□□ 0.59
MBD1-205ENST00000353909 DISP2A7MBM2 1401 aa18.77■□□□□ 0.59
MBD1-205ENST00000353909 FSD2A1L4K1 749 aa18.76■□□□□ 0.59
MBD1-205ENST00000353909 DNAJC2Q99543 621 aaKnown RBP18.76■□□□□ 0.59
MBD1-205ENST00000353909 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
MBD1-205ENST00000353909 ATP5JP18859 108 aa18.76■□□□□ 0.59
MBD1-205ENST00000353909 RUFY3Q7L099 469 aa18.76■□□□□ 0.59
MBD1-205ENST00000353909 FAM89AQ96GI7 184 aa18.76■□□□□ 0.59
MBD1-205ENST00000353909 ISCA1Q9BUE6 129 aa18.76■□□□□ 0.59
MBD1-205ENST00000353909 TCIRG1Q13488 830 aa18.75■□□□□ 0.59
MBD1-205ENST00000353909 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
MBD1-205ENST00000353909 NEUROD6Q96NK8 337 aa18.75■□□□□ 0.59
MBD1-205ENST00000353909 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.592e-6■■■■■ 29.9
MBD1-205ENST00000353909 HLFQ16534 295 aa18.74■□□□□ 0.59
MBD1-205ENST00000353909 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
MBD1-205ENST00000353909 COL16A1Q07092 1604 aaPredicted RBP18.74■□□□□ 0.59
MBD1-205ENST00000353909 GOLGA6L3A6NEY3 463 aa18.74■□□□□ 0.59
MBD1-205ENST00000353909 LARGE1O95461 756 aa18.74■□□□□ 0.59
MBD1-205ENST00000353909 SLFNL1Q499Z3 407 aa18.74■□□□□ 0.59
MBD1-205ENST00000353909 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
MBD1-205ENST00000353909 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
MBD1-205ENST00000353909 GPTP24298 496 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 GAS2L3Q86XJ1 694 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 EXOC5O00471 708 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 KCNJ4P48050 445 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 CREB3L3Q68CJ9 461 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 INTS4Q96HW7 963 aaKnown RBP18.73■□□□□ 0.59
MBD1-205ENST00000353909 LMBRD1Q9NUN5 540 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 DDX49Q9Y6V7 483 aaKnown RBP18.73■□□□□ 0.59
MBD1-205ENST00000353909 BCL9O00512 1426 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
MBD1-205ENST00000353909 GOLGA6L22H0YM25 854 aa18.73■□□□□ 0.59
MBD1-205ENST00000353909 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
MBD1-205ENST00000353909 STARD3NLO95772 234 aa18.72■□□□□ 0.59
MBD1-205ENST00000353909 FOXD4L6Q3SYB3 417 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms