RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 SH2B1Q9NRF2 756 aaPredicted RBP21.27■□□□□ 0.99
CTSB-202ENST00000353047 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
CTSB-202ENST00000353047 GOLIM4O00461 696 aa21.26■□□□□ 0.99
CTSB-202ENST00000353047 HYPKQ9NX55 129 aa21.26■□□□□ 0.99
CTSB-202ENST00000353047 IBTKQ9P2D0 1353 aaPredicted RBP21.26■□□□□ 0.99
CTSB-202ENST00000353047 PTPN14Q15678 1187 aa21.26■□□□□ 0.99
CTSB-202ENST00000353047 CLEC17AQ6ZS10 378 aa21.26■□□□□ 0.99
CTSB-202ENST00000353047 EVI5LQ96CN4 794 aa21.26■□□□□ 0.99
CTSB-202ENST00000353047 ZFP91Q96JP5 570 aaPredicted RBP21.26■□□□□ 0.99
CTSB-202ENST00000353047 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
CTSB-202ENST00000353047 CCAR1Q8IX12 1150 aaKnown RBP21.25■□□□□ 0.99
CTSB-202ENST00000353047 CCDC144CPQ8IYA2 1237 aa21.25■□□□□ 0.99
CTSB-202ENST00000353047 SCAND2PQ9GZW5 306 aaPredicted RBP21.25■□□□□ 0.99
CTSB-202ENST00000353047 PLEKHO1Q53GL0 409 aaPredicted RBP21.25■□□□□ 0.99
CTSB-202ENST00000353047 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
CTSB-202ENST00000353047 CCDC171Q6TFL3 1326 aa21.25■□□□□ 0.99
CTSB-202ENST00000353047 ATP2B3Q16720 1220 aa21.25■□□□□ 0.99
CTSB-202ENST00000353047 TAF6LQ9Y6J9 622 aa21.25■□□□□ 0.99
CTSB-202ENST00000353047 EAF2Q96CJ1 260 aaPredicted RBP21.24■□□□□ 0.99
CTSB-202ENST00000353047 OSBPL3Q9H4L5 887 aa21.24■□□□□ 0.99
CTSB-202ENST00000353047 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
CTSB-202ENST00000353047 DBF4Q9UBU7 674 aaPredicted RBP21.24■□□□□ 0.99
CTSB-202ENST00000353047 SKILP12757 684 aa21.24■□□□□ 0.99
CTSB-202ENST00000353047 APOBRQ0VD83 1088 aa21.24■□□□□ 0.99
CTSB-202ENST00000353047 COL9A3Q14050 684 aaPredicted RBP21.24■□□□□ 0.99
CTSB-202ENST00000353047 HOXC9P31274 260 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 SYNE3Q6ZMZ3 975 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 SLC27A2O14975 620 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 SSH3Q8TE77 659 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 RAPGEF4Q8WZA2 1011 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 ERC1Q8IUD2 1116 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 NEK1Q96PY6 1258 aa21.23■□□□□ 0.99
CTSB-202ENST00000353047 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
CTSB-202ENST00000353047 AOPEPQ8N6M6 819 aa21.22■□□□□ 0.99
CTSB-202ENST00000353047 PPRC1Q5VV67 1664 aaKnown RBP21.22■□□□□ 0.99
CTSB-202ENST00000353047 LTKP29376 864 aa21.22■□□□□ 0.99
CTSB-202ENST00000353047 NBPF6Q5VWK0 638 aa21.22■□□□□ 0.99
CTSB-202ENST00000353047 NBPF4Q96M43 638 aa21.22■□□□□ 0.99
CTSB-202ENST00000353047 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
CTSB-202ENST00000353047 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
CTSB-202ENST00000353047 POLR3GO15318 223 aaPredicted RBP21.21■□□□□ 0.99
CTSB-202ENST00000353047 CEP135Q66GS9 1140 aa21.21■□□□□ 0.99
CTSB-202ENST00000353047 COPS6Q7L5N1 327 aa21.21■□□□□ 0.99
CTSB-202ENST00000353047 SUCLG2Q96I99 432 aa21.21■□□□□ 0.99
CTSB-202ENST00000353047 ABCC3O15438 1527 aa21.21■□□□□ 0.99
CTSB-202ENST00000353047 ZNF589Q86UQ0 364 aaPredicted RBP21.21■□□□□ 0.99
CTSB-202ENST00000353047 ZSWIM4Q9H7M6 989 aa21.21■□□□□ 0.99
CTSB-202ENST00000353047 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 A0A1B0GVL5 298 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 RXRAP19793 462 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 VPS53Q5VIR6 699 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 AP5Z1O43299 807 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 TMC6Q7Z403 805 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 SETD1BQ9UPS6 1966 aaKnown RBP21.2■□□□□ 0.98
CTSB-202ENST00000353047 ANKRD1Q15327 319 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 XAGE3Q8WTP9 111 aa21.2■□□□□ 0.98
CTSB-202ENST00000353047 LEO1Q8WVC0 666 aaPredicted RBP21.2■□□□□ 0.98
CTSB-202ENST00000353047 RGS12O14924 1447 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 PES1O00541 588 aaKnown RBP21.19■□□□□ 0.98
CTSB-202ENST00000353047 TPM3P06753 285 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 GRM8O00222 908 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 MNS1Q8NEH6 495 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 MED14O60244 1454 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 A0A087WZG4 1122 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 TIMM10P62072 90 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 FLT4P35916 1363 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
CTSB-202ENST00000353047 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
CTSB-202ENST00000353047 SERPINC1P01008 464 aa21.18■□□□□ 0.98
CTSB-202ENST00000353047 MARCKSP29966 332 aaPredicted RBP21.18■□□□□ 0.98
CTSB-202ENST00000353047 TPM4P67936 248 aa21.18■□□□□ 0.98
CTSB-202ENST00000353047 MROH2AA6NES4 1674 aa21.18■□□□□ 0.98
CTSB-202ENST00000353047 LMOD1P29536 600 aaPredicted RBP21.18■□□□□ 0.98
CTSB-202ENST00000353047 RRP12Q5JTH9 1297 aaKnown RBP21.18■□□□□ 0.98
CTSB-202ENST00000353047 NFXL1Q6ZNB6 911 aa21.18■□□□□ 0.98
CTSB-202ENST00000353047 CFAP45Q9UL16 551 aa21.18■□□□□ 0.98
CTSB-202ENST00000353047 TULP1O00294 542 aaPredicted RBP21.17■□□□□ 0.98
CTSB-202ENST00000353047 TFCP2Q12800 502 aa21.17■□□□□ 0.98
CTSB-202ENST00000353047 CEP57L1Q8IYX8 460 aa21.17■□□□□ 0.98
CTSB-202ENST00000353047 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
CTSB-202ENST00000353047 KIAA0232Q92628 1395 aa21.17■□□□□ 0.98
CTSB-202ENST00000353047 RALYLQ86SE5 291 aaKnown RBP21.17■□□□□ 0.98
CTSB-202ENST00000353047 DDX19AQ9NUU7 478 aaKnown RBP21.17■□□□□ 0.98
CTSB-202ENST00000353047 MRVI1Q9Y6F6 885 aa21.17■□□□□ 0.98
CTSB-202ENST00000353047 KIAA1524Q8TCG1 905 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 KCNF1Q9H3M0 494 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 ZBTB3Q9H5J0 574 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 CCDC69A6NI79 296 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 STAP2Q9UGK3 403 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 HIP1O00291 1037 aa21.16■□□□□ 0.98
CTSB-202ENST00000353047 CFAP74Q9C0B2 1584 aa21.15■□□□□ 0.98
CTSB-202ENST00000353047 BEND3Q5T5X7 828 aa21.15■□□□□ 0.98
CTSB-202ENST00000353047 CACTINQ8WUQ7 758 aaKnown RBP21.15■□□□□ 0.98
CTSB-202ENST00000353047 ROBO2Q9HCK4 1378 aa21.15■□□□□ 0.98
CTSB-202ENST00000353047 KCNA6P17658 529 aa21.15■□□□□ 0.98
CTSB-202ENST00000353047 URI1O94763 535 aaPredicted RBP21.14■□□□□ 0.98
CTSB-202ENST00000353047 EIF4A1P60842 406 aaKnown RBP21.14■□□□□ 0.98
CTSB-202ENST00000353047 CFAP100Q494V2 611 aa21.14■□□□□ 0.98
CTSB-202ENST00000353047 MAP3K5Q99683 1374 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms