RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
CD44-205ENST00000352818 EMILIN1Q9Y6C2 1016 aa10.78□□□□□ -0.68
CD44-205ENST00000352818 GJA3Q9Y6H8 435 aa10.78□□□□□ -0.68
CD44-205ENST00000352818 PKN2Q16513 984 aaKnown RBP10.77□□□□□ -0.69
CD44-205ENST00000352818 CSRNP1Q96S65 589 aa10.77□□□□□ -0.69
CD44-205ENST00000352818 PGAP2Q9UHJ9 254 aa10.77□□□□□ -0.69
CD44-205ENST00000352818 ADAMTS8Q9UP79 889 aa10.77□□□□□ -0.69
CD44-205ENST00000352818 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.69
CD44-205ENST00000352818 HUNKP57058 714 aa10.76□□□□□ -0.69
CD44-205ENST00000352818 CABP4P57796 275 aa10.76□□□□□ -0.69
CD44-205ENST00000352818 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
CD44-205ENST00000352818 ZNF408Q9H9D4 720 aa10.76□□□□□ -0.69
CD44-205ENST00000352818 ZNF521Q96K83 1311 aa10.76□□□□□ -0.69
CD44-205ENST00000352818 LMOD1P29536 600 aaPredicted RBP10.75□□□□□ -0.69
CD44-205ENST00000352818 HIRAP54198 1017 aaPredicted RBP10.75□□□□□ -0.69
CD44-205ENST00000352818 SLC51AQ86UW1 340 aa10.75□□□□□ -0.69
CD44-205ENST00000352818 MORC1Q86VD1 984 aa10.75□□□□□ -0.69
CD44-205ENST00000352818 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
CD44-205ENST00000352818 ZNF296Q8WUU4 475 aaPredicted RBP10.75□□□□□ -0.69
CD44-205ENST00000352818 BCORQ6W2J9 1755 aa10.75□□□□□ -0.69
CD44-205ENST00000352818 COL3A1P02461 1466 aaPredicted RBP10.74□□□□□ -0.69
CD44-205ENST00000352818 RGMBQ6NW40 437 aa10.74□□□□□ -0.69
CD44-205ENST00000352818 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
CD44-205ENST00000352818 ARFGEF2Q9Y6D5 1785 aa10.74□□□□□ -0.69
CD44-205ENST00000352818 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
CD44-205ENST00000352818 FBXO46Q6PJ61 603 aaPredicted RBP10.73□□□□□ -0.69
CD44-205ENST00000352818 ADARB2Q9NS39 739 aaKnown RBP10.73□□□□□ -0.69
CD44-205ENST00000352818 PPP4R2Q9NY27 417 aa10.73□□□□□ -0.69
CD44-205ENST00000352818 GPRC5DQ9NZD1 345 aa10.73□□□□□ -0.69
CD44-205ENST00000352818 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
CD44-205ENST00000352818 KLRG2A4D1S0 409 aaPredicted RBP10.72□□□□□ -0.69
CD44-205ENST00000352818 H0YGN5 161 aa10.72□□□□□ -0.69
CD44-205ENST00000352818 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
CD44-205ENST00000352818 RTKN2Q8IZC4 609 aa10.72□□□□□ -0.69
CD44-205ENST00000352818 CFAP53Q96M91 514 aa10.72□□□□□ -0.69
CD44-205ENST00000352818 SLC10A3P09131 477 aa10.71□□□□□ -0.69
CD44-205ENST00000352818 EN2P19622 333 aaPredicted RBP10.71□□□□□ -0.69
CD44-205ENST00000352818 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
CD44-205ENST00000352818 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
CD44-205ENST00000352818 TRPM4Q8TD43 1214 aa10.71□□□□□ -0.69
CD44-205ENST00000352818 RBM27Q9P2N5 1060 aaKnown RBP10.71□□□□□ -0.69
CD44-205ENST00000352818 HSP90AB1P08238 724 aaKnown RBP10.7□□□□□ -0.7
CD44-205ENST00000352818 USP48Q86UV5 1035 aa10.7□□□□□ -0.7
CD44-205ENST00000352818 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
CD44-205ENST00000352818 PSMD1Q99460 953 aa10.7□□□□□ -0.7
CD44-205ENST00000352818 SHTN1A0MZ66 631 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 TBC1D8O95759 1140 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 NPR1P16066 1061 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
CD44-205ENST00000352818 ZNF157P51786 506 aaPredicted RBP10.69□□□□□ -0.7
CD44-205ENST00000352818 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 PRO3102Q9H379 93 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 RCAN3Q9UKA8 241 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 HDAC9Q9UKV0 1011 aa10.69□□□□□ -0.7
CD44-205ENST00000352818 MTHFSP49914 203 aa10.68□□□□□ -0.7
CD44-205ENST00000352818 RRP1P56182 461 aaKnown RBP10.68□□□□□ -0.7
CD44-205ENST00000352818 SLC39A6Q13433 755 aa10.68□□□□□ -0.7
CD44-205ENST00000352818 ZNF530Q6P9A1 599 aaPredicted RBP10.68□□□□□ -0.7
CD44-205ENST00000352818 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
CD44-205ENST00000352818 TRMT2AQ8IZ69 625 aaKnown RBP10.68□□□□□ -0.7
CD44-205ENST00000352818 R3HDMLQ9H3Y0 253 aa10.68□□□□□ -0.7
CD44-205ENST00000352818 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
CD44-205ENST00000352818 SOX1O00570 391 aaPredicted RBP10.67□□□□□ -0.7
CD44-205ENST00000352818 GMPSP49915 693 aaPredicted RBP10.67□□□□□ -0.7
CD44-205ENST00000352818 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
CD44-205ENST00000352818 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
CD44-205ENST00000352818 EIF4A2Q14240 407 aaKnown RBP10.67□□□□□ -0.7
CD44-205ENST00000352818 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
CD44-205ENST00000352818 RUNDC1Q96C34 613 aa10.67□□□□□ -0.7
CD44-205ENST00000352818 GBA2Q9HCG7 927 aaPredicted RBP10.67□□□□□ -0.7
CD44-205ENST00000352818 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
CD44-205ENST00000352818 GPR25O00155 361 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
CD44-205ENST00000352818 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 ST5P78524 1137 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 SLFN5Q08AF3 891 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 RASAL3Q86YV0 1011 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 SCN7AQ01118 1682 aa10.66□□□□□ -0.7
CD44-205ENST00000352818 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
CD44-205ENST00000352818 APAF1O14727 1248 aa10.65□□□□□ -0.7
CD44-205ENST00000352818 CXCL9Q07325 125 aa10.65□□□□□ -0.7
CD44-205ENST00000352818 CCDC27Q2M243 656 aa10.65□□□□□ -0.7
CD44-205ENST00000352818 NOM1Q5C9Z4 860 aaKnown RBP10.65□□□□□ -0.7
CD44-205ENST00000352818 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
CD44-205ENST00000352818 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
CD44-205ENST00000352818 ADM5C9JUS6 153 aa10.64□□□□□ -0.71
CD44-205ENST00000352818 E9PSI1 815 aa10.64□□□□□ -0.71
CD44-205ENST00000352818 PLEKHO1Q53GL0 409 aaPredicted RBP10.64□□□□□ -0.71
CD44-205ENST00000352818 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
CD44-205ENST00000352818 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
CD44-205ENST00000352818 AKAP11Q9UKA4 1901 aa10.64□□□□□ -0.71
CD44-205ENST00000352818 EGFRP00533 1210 aa10.63□□□□□ -0.71
CD44-205ENST00000352818 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
CD44-205ENST00000352818 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
CD44-205ENST00000352818 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
CD44-205ENST00000352818 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
CD44-205ENST00000352818 TTC28Q96AY4 2481 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms