RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 VPS53Q5VIR6 699 aa16.83■□□□□ 0.28
RLIM-202ENST00000349225 E4F1Q66K89 784 aaPredicted RBP16.83■□□□□ 0.28
RLIM-202ENST00000349225 AOX1Q06278 1338 aa16.83■□□□□ 0.28
RLIM-202ENST00000349225 MRFAP1L1Q96HT8 127 aa16.83■□□□□ 0.28
RLIM-202ENST00000349225 ZSWIM6Q9HCJ5 1215 aa16.83■□□□□ 0.28
RLIM-202ENST00000349225 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
RLIM-202ENST00000349225 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
RLIM-202ENST00000349225 ZCCHC17Q9NP64 241 aaKnown RBP16.82■□□□□ 0.28
RLIM-202ENST00000349225 TRIM66O15016 1216 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 FANCGO15287 622 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 POLR3GO15318 223 aaPredicted RBP16.82■□□□□ 0.28
RLIM-202ENST00000349225 SYT10Q6XYQ8 523 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 SMARCE1Q969G3 411 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 DDX19AQ9NUU7 478 aaKnown RBP16.82■□□□□ 0.28
RLIM-202ENST00000349225 SPATA32Q96LK8 384 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 KCND1Q9NSA2 647 aa16.82■□□□□ 0.28
RLIM-202ENST00000349225 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
RLIM-202ENST00000349225 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
RLIM-202ENST00000349225 UBXN6Q9BZV1 441 aa16.81■□□□□ 0.28
RLIM-202ENST00000349225 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
RLIM-202ENST00000349225 SEC31AO94979 1220 aaKnown RBP16.8■□□□□ 0.28
RLIM-202ENST00000349225 GNAI3P08754 354 aa16.8■□□□□ 0.28
RLIM-202ENST00000349225 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
RLIM-202ENST00000349225 DHX40Q8IX18 779 aaKnown RBP16.8■□□□□ 0.28
RLIM-202ENST00000349225 SASH3O75995 380 aa16.8■□□□□ 0.28
RLIM-202ENST00000349225 ARHGAP29Q52LW3 1261 aa16.8■□□□□ 0.28
RLIM-202ENST00000349225 SULT6B1Q6IMI4 303 aa16.8■□□□□ 0.28
RLIM-202ENST00000349225 SOS1Q07889 1333 aaPredicted RBP16.8■□□□□ 0.28
RLIM-202ENST00000349225 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
RLIM-202ENST00000349225 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
RLIM-202ENST00000349225 GYS2P54840 703 aa16.79■□□□□ 0.28
RLIM-202ENST00000349225 PPP1R13BQ96KQ4 1090 aa16.79■□□□□ 0.28
RLIM-202ENST00000349225 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
RLIM-202ENST00000349225 NOP2P46087 812 aaKnown RBP16.79■□□□□ 0.28
RLIM-202ENST00000349225 RSPH14Q9UHP6 348 aa16.79■□□□□ 0.28
RLIM-202ENST00000349225 CPS1P31327 1500 aa16.79■□□□□ 0.28
RLIM-202ENST00000349225 FOXO3O43524 673 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
RLIM-202ENST00000349225 KRBA2Q6ZNG9 492 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 EPC1Q9H2F5 836 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 NEMFO60524 1076 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 KCNB2Q92953 911 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 AGLP35573 1532 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 SNW1Q13573 536 aaKnown RBP16.78■□□□□ 0.28
RLIM-202ENST00000349225 ZSCAN31Q96LW9 406 aaPredicted RBP16.78■□□□□ 0.28
RLIM-202ENST00000349225 TSPYL1Q9H0U9 437 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
RLIM-202ENST00000349225 CHD2O14647 1828 aaKnown RBP16.77■□□□□ 0.28
RLIM-202ENST00000349225 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.28
RLIM-202ENST00000349225 SCAND2PQ9GZW5 306 aaPredicted RBP16.77■□□□□ 0.28
RLIM-202ENST00000349225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.77■□□□□ 0.282e-7■□□□□ 10
RLIM-202ENST00000349225 EIF4A2Q14240 407 aaKnown RBP16.77■□□□□ 0.27
RLIM-202ENST00000349225 NECTIN1Q15223 517 aa16.77■□□□□ 0.27
RLIM-202ENST00000349225 ERCC4Q92889 916 aaPredicted RBP16.77■□□□□ 0.27
RLIM-202ENST00000349225 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.27
RLIM-202ENST00000349225 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.27
RLIM-202ENST00000349225 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.27
RLIM-202ENST00000349225 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
RLIM-202ENST00000349225 GOLGA6L4A6NEF3 574 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 REXO1L1PQ8IX06 675 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 RHPN1Q8TCX5 695 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 NECTIN2Q92692 538 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 CHMP4CQ96CF2 233 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 FLIIQ13045 1269 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 ARMCX5Q6P1M9 558 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
RLIM-202ENST00000349225 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 DDX11Q96FC9 970 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 GOLPH3LQ9H4A5 285 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 ADGRL3Q9HAR2 1447 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 RIMS1Q86UR5 1692 aaKnown RBP16.75■□□□□ 0.27
RLIM-202ENST00000349225 NRKQ7Z2Y5 1582 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 MYO1CO00159 1063 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
RLIM-202ENST00000349225 FTOQ9C0B1 505 aaKnown RBP eCLIP16.75■□□□□ 0.27
RLIM-202ENST00000349225 SURF6O75683 361 aaKnown RBP16.74■□□□□ 0.27
RLIM-202ENST00000349225 TBC1D8O95759 1140 aa16.74■□□□□ 0.27
RLIM-202ENST00000349225 C10orf67Q8IYJ2 551 aa16.74■□□□□ 0.27
RLIM-202ENST00000349225 CNTROBQ8N137 903 aa16.74■□□□□ 0.27
RLIM-202ENST00000349225 FAM208AQ9UK61 1670 aaKnown RBP16.74■□□□□ 0.27
RLIM-202ENST00000349225 MLECQ14165 292 aa16.74■□□□□ 0.27
RLIM-202ENST00000349225 PPP1R42Q7Z4L9 355 aa16.74■□□□□ 0.27
RLIM-202ENST00000349225 RAB11FIP3O75154 756 aa16.73■□□□□ 0.27
RLIM-202ENST00000349225 RASSF4Q9H2L5 321 aa16.73■□□□□ 0.27
RLIM-202ENST00000349225 EDC4Q6P2E9 1401 aaKnown RBP16.73■□□□□ 0.27
RLIM-202ENST00000349225 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
RLIM-202ENST00000349225 JAK2O60674 1132 aa16.73■□□□□ 0.27
RLIM-202ENST00000349225 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
RLIM-202ENST00000349225 OSBPL5Q9H0X9 879 aaPredicted RBP16.73■□□□□ 0.27
RLIM-202ENST00000349225 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
RLIM-202ENST00000349225 OAS2P29728 719 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms