RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 OFD1O75665 1012 aa17.46■□□□□ 0.39
ARHGEF1-202ENST00000347545 GPATCH3Q96I76 525 aa17.46■□□□□ 0.39
ARHGEF1-202ENST00000347545 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF1-202ENST00000347545 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
ARHGEF1-202ENST00000347545 TAF6LQ9Y6J9 622 aa17.46■□□□□ 0.39
ARHGEF1-202ENST00000347545 A0A0D9SFI3 127 aa17.46■□□□□ 0.38
ARHGEF1-202ENST00000347545 MSNP26038 577 aaKnown RBP17.46■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZNF790Q6PG37 636 aa17.46■□□□□ 0.38
ARHGEF1-202ENST00000347545 SIL1Q9H173 461 aa17.46■□□□□ 0.38
ARHGEF1-202ENST00000347545 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.38
ARHGEF1-202ENST00000347545 GJB2P29033 226 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 ME3Q16798 604 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 CREB3L3Q68CJ9 461 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 LRP10Q7Z4F1 713 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 MTMR6Q9Y217 621 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZNF500O60304 480 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZC3H6P61129 1189 aaKnown RBP17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF1-202ENST00000347545 MED23Q9ULK4 1368 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 JCADQ9P266 1359 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 MYL6BP14649 208 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZKSCAN5Q9Y2L8 839 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 DDX58O95786 925 aaKnown RBP17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
ARHGEF1-202ENST00000347545 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
ARHGEF1-202ENST00000347545 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
ARHGEF1-202ENST00000347545 SLC27A2O14975 620 aa17.43■□□□□ 0.38
ARHGEF1-202ENST00000347545 RRP9O43818 475 aaKnown RBP17.43■□□□□ 0.38
ARHGEF1-202ENST00000347545 GCKRQ14397 625 aa17.43■□□□□ 0.38
ARHGEF1-202ENST00000347545 BOLA2Q9H3K6 86 aa17.43■□□□□ 0.38
ARHGEF1-202ENST00000347545 PHKG2P15735 406 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 CCDC183Q5T5S1 534 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 COL15A1P39059 1388 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 HDAC5Q9UQL6 1122 aa17.42■□□□□ 0.38
ARHGEF1-202ENST00000347545 FIBPO43427 364 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 PIP4K2AP48426 406 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 UBE2HP62256 183 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 TPRNQ4KMQ1 711 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZNF589Q86UQ0 364 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 EDC3Q96F86 508 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 DNM1Q05193 864 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 MYD88Q99836 296 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 METTL22Q9BUU2 404 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 ABCC6O95255 1503 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 STRCP1A6NGW2 1772 aa17.41■□□□□ 0.38
ARHGEF1-202ENST00000347545 PHF14O94880 888 aa17.4■□□□□ 0.38
ARHGEF1-202ENST00000347545 CCDC39Q9UFE4 941 aa17.4■□□□□ 0.38
ARHGEF1-202ENST00000347545 DDX17Q92841 729 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-202ENST00000347545 USP16Q9Y5T5 823 aa17.4■□□□□ 0.38
ARHGEF1-202ENST00000347545 LAMA4Q16363 1823 aa17.4■□□□□ 0.38
ARHGEF1-202ENST00000347545 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.38
ARHGEF1-202ENST00000347545 FUCA2Q9BTY2 467 aa17.39■□□□□ 0.38
ARHGEF1-202ENST00000347545 FSD1Q9BTV5 496 aa17.39■□□□□ 0.37
ARHGEF1-202ENST00000347545 HIP1O00291 1037 aa17.39■□□□□ 0.37
ARHGEF1-202ENST00000347545 CHGBP05060 677 aa17.39■□□□□ 0.37
ARHGEF1-202ENST00000347545 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF1-202ENST00000347545 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
ARHGEF1-202ENST00000347545 TPM2P07951 284 aa17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 TJP1Q07157 1748 aa17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 TOB2Q14106 344 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
ARHGEF1-202ENST00000347545 PROSER2Q86WR7 435 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF1-202ENST00000347545 NDUFB9Q9Y6M9 179 aa17.37■□□□□ 0.37
ARHGEF1-202ENST00000347545 PARP4Q9UKK3 1724 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-202ENST00000347545 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF1-202ENST00000347545 PTPN12Q05209 780 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-202ENST00000347545 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
ARHGEF1-202ENST00000347545 CYP27B1O15528 508 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 MCM5P33992 734 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 KCNJ4P48050 445 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 ZNF609O15014 1411 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 TAF5LO75529 589 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 TFCP2Q12800 502 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 USP25Q9UHP3 1055 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms