RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 KNDC1Q76NI1 1749 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 XBP1P17861 261 aa16.33■□□□□ 0.21
CSNK1G3-201ENST00000345990 ATP2B3Q16720 1220 aa16.33■□□□□ 0.21
CSNK1G3-201ENST00000345990 MYO5BQ9ULV0 1848 aa16.33■□□□□ 0.21
CSNK1G3-201ENST00000345990 IDH1O75874 414 aaKnown RBP16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 NEK4P51957 841 aa16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 AOX1Q06278 1338 aa16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 SIK1P57059 783 aa16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
CSNK1G3-201ENST00000345990 BAG6P46379 1132 aa16.32■□□□□ 0.2
CSNK1G3-201ENST00000345990 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
CSNK1G3-201ENST00000345990 RXRBP28702 533 aa16.32■□□□□ 0.2
CSNK1G3-201ENST00000345990 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
CSNK1G3-201ENST00000345990 CWC27Q6UX04 472 aaKnown RBP16.32■□□□□ 0.2
CSNK1G3-201ENST00000345990 PDE1AP54750 535 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 TRIM44Q96DX7 344 aaPredicted RBP16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 CYP27B1O15528 508 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 VPS72Q15906 364 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
CSNK1G3-201ENST00000345990 NRDCO43847 1150 aa16.3■□□□□ 0.2
CSNK1G3-201ENST00000345990 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
CSNK1G3-201ENST00000345990 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
CSNK1G3-201ENST00000345990 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
CSNK1G3-201ENST00000345990 KCNQ3O43525 872 aa16.3■□□□□ 0.2
CSNK1G3-201ENST00000345990 POLD1P28340 1107 aa16.3■□□□□ 0.2
CSNK1G3-201ENST00000345990 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 EYA2O00167 538 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 TDO2P48775 406 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 GSTO1P78417 241 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 CNBD1Q8NA66 436 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 CTDP1Q9Y5B0 961 aaPredicted RBP16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 ABCF2Q9UG63 623 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 KIF20BQ96Q89 1820 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
CSNK1G3-201ENST00000345990 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 DZIP1Q86YF9 867 aaKnown RBP16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 TNNQ9UQP3 1299 aa16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 AFF2P51816 1311 aa16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
CSNK1G3-201ENST00000345990 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
CSNK1G3-201ENST00000345990 SSH2Q76I76 1423 aa16.27■□□□□ 0.2
CSNK1G3-201ENST00000345990 C6orf229H3BNL8 230 aa16.27■□□□□ 0.2
CSNK1G3-201ENST00000345990 CDKL5O76039 1030 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 BAG3O95817 575 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 APBA3O96018 575 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 EYA3Q99504 573 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 GIGYF2Q6Y7W6 1299 aaKnown RBP16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 RBM6P78332 1123 aaKnown RBP16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 ASAP1Q9ULH1 1129 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 RAD50Q92878 1312 aa16.26■□□□□ 0.19
CSNK1G3-201ENST00000345990 PIGBQ92521 554 aa16.25■□□□□ 0.19
CSNK1G3-201ENST00000345990 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
CSNK1G3-201ENST00000345990 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
CSNK1G3-201ENST00000345990 SSH3Q8TE77 659 aa16.25■□□□□ 0.19
CSNK1G3-201ENST00000345990 CDK11BP21127 795 aaKnown RBP16.25■□□□□ 0.19
CSNK1G3-201ENST00000345990 USP44Q9H0E7 712 aa16.25■□□□□ 0.19
CSNK1G3-201ENST00000345990 NAPBQ9H115 298 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 MARCH6O60337 910 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 GJD4Q96KN9 370 aaPredicted RBP16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 NRKQ7Z2Y5 1582 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 GOLIM4O00461 696 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 TPM4P67936 248 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 ZNF622Q969S3 477 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSNK1G3-201ENST00000345990 MROH5Q6ZUA9 1318 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 CRKLP46109 303 aaKnown RBP16.23■□□□□ 0.19
CSNK1G3-201ENST00000345990 ANAPC15P60006 121 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms