RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 MAP3K19Q56UN5 1328 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 IARSP41252 1262 aaKnown RBP10.08□□□□□ -0.8
FGD6-201ENST00000343958 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 GRM8O00222 908 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 NCOA7Q8NI08 942 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 METAP2P50579 478 aaKnown RBP eCLIP10.08□□□□□ -0.8
FGD6-201ENST00000343958 ANO6Q4KMQ2 910 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 DNAJC25Q9H1X3 360 aa10.08□□□□□ -0.8
FGD6-201ENST00000343958 SEPT11Q9NVA2 429 aaKnown RBP10.07□□□□□ -0.8
FGD6-201ENST00000343958 DACT1Q9NYF0 836 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 PDIA4P13667 645 aaKnown RBP10.07□□□□□ -0.8
FGD6-201ENST00000343958 ZNF165P49910 485 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 STX1AQ16623 288 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 APOBRQ0VD83 1088 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 CCDC186Q7Z3E2 898 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 KIAA1328Q86T90 577 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 UBXN4Q92575 508 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 ZNF219Q9P2Y4 722 aaPredicted RBP10.07□□□□□ -0.8
FGD6-201ENST00000343958 CASQ1P31415 396 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 ABCC1P33527 1531 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 EXOC5O00471 708 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 HSP90AA4PQ58FG1 418 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 CDR1P51861 262 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 HMG20BQ9P0W2 317 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 CTAGE5O15320 804 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 RNMTO43148 476 aaKnown RBP10.07□□□□□ -0.8
FGD6-201ENST00000343958 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
FGD6-201ENST00000343958 DZIP1Q86YF9 867 aaKnown RBP10.07□□□□□ -0.8
FGD6-201ENST00000343958 YTHDC2Q9H6S0 1430 aaKnown RBP10.06□□□□□ -0.8
FGD6-201ENST00000343958 ARHGAP29Q52LW3 1261 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 ODF2Q5BJF6 829 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 SBNO2Q9Y2G9 1366 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 KLHDC4Q8TBB5 520 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
FGD6-201ENST00000343958 LGR6Q9HBX8 967 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
FGD6-201ENST00000343958 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 CCDC102AQ96A19 550 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 LEKR1Q6ZMV7 388 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
FGD6-201ENST00000343958 PKNOX2Q96KN3 472 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 VAT1LQ9HCJ6 419 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 ZNF76P36508 570 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 ANAPC15P60006 121 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 MAP3K5Q99683 1374 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
FGD6-201ENST00000343958 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
FGD6-201ENST00000343958 FLT4P35916 1363 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 CFAP43Q8NDM7 1665 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 ZNF444Q8N0Y2 327 aaPredicted RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 ARHGEF12Q9NZN5 1544 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 ADGRL2O95490 1459 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 ENOX2Q16206 610 aaKnown RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 TTC12Q9H892 705 aaPredicted RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 USP19O94966 1318 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 HELBQ8NG08 1087 aaPredicted RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 KCNA6P17658 529 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 ZMYM4Q5VZL5 1548 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 ERLIN1O75477 346 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 ZNF518AQ6AHZ1 1483 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 SYCP1Q15431 976 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 RRAGDQ9NQL2 400 aaPredicted RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 ANKIB1Q9P2G1 1089 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 MARCKSP29966 332 aaPredicted RBP10.05□□□□□ -0.8
FGD6-201ENST00000343958 ALG1Q9BT22 464 aa10.05□□□□□ -0.8
FGD6-201ENST00000343958 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 SLC4A4Q9Y6R1 1079 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 CLCN1P35523 988 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
FGD6-201ENST00000343958 TMCO3Q6UWJ1 677 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 AOPEPQ8N6M6 819 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 BLMP54132 1417 aaPredicted RBP10.04□□□□□ -0.8
FGD6-201ENST00000343958 ZPR1O75312 459 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 DNA2P51530 1060 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 NOLC1Q14978 699 aaKnown RBP eCLIP10.04□□□□□ -0.8
FGD6-201ENST00000343958 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
FGD6-201ENST00000343958 CWC15Q9P013 229 aaKnown RBP10.04□□□□□ -0.8
FGD6-201ENST00000343958 RXRAP19793 462 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 ZSCAN12O43309 604 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 PRC1O43663 620 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 PNMA6EA0A0J9YXQ4 647 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 MFSD6Q6ZSS7 791 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 IQCA1Q86XH1 822 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms