RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 H3BQV1 296 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 SURF6O75683 361 aaKnown RBP12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 TNNT3P45378 269 aaPredicted RBP12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 UNC5CLQ8IV45 518 aa12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 GNAI2P04899 355 aa12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 TOMM22Q9NS69 142 aa12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
CAPRIN1-201ENST00000341394 NBPF7P0C2Y1 421 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 PTMSP20962 102 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 PAPPAQ13219 1627 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 USP25Q9UHP3 1055 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 KCPQ6ZWJ8 1503 aa12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 OTUD7AQ8TE49 926 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-201ENST00000341394 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.4
CAPRIN1-201ENST00000341394 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.4
CAPRIN1-201ENST00000341394 ASAP1Q9ULH1 1129 aa12.52□□□□□ -0.4
CAPRIN1-201ENST00000341394 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.4
CAPRIN1-201ENST00000341394 GOLGA6L19H0YKK7 550 aa12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 TRIM5Q9C035 493 aa12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 SIL1Q9H173 461 aa12.52□□□□□ -0.41
CAPRIN1-201ENST00000341394 STARD3NLO95772 234 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 NUCB1Q02818 461 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 SPATA31A1Q5TZJ5 1347 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 A1BGP04217 495 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 BEND3Q5T5X7 828 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 C17orf53Q8N3J3 647 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 PIGBQ92521 554 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 MYD88Q99836 296 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-201ENST00000341394 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 PES1O00541 588 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 ZGPATQ8N5A5 531 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 PHF14O94880 888 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 ANKRD44Q8N8A2 993 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 LRP6O75581 1613 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 NBPF14Q5TI25 921 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 NBPF10Q6P3W6 841 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 NBPF15Q8N660 670 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
CAPRIN1-201ENST00000341394 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 RRP9O43818 475 aaKnown RBP12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 NRDCO43847 1150 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 JARID2Q92833 1246 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 THRAP3Q9Y2W1 955 aaKnown RBP12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 FAM182BQ5T319 152 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 GCC1Q96CN9 775 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
CAPRIN1-201ENST00000341394 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
CAPRIN1-201ENST00000341394 IGKV5-2P06315 115 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 ISY1Q9ULR0 285 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 PXDNLA1KZ92 1463 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 SPATA31A6Q5VVP1 1343 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 KIF6Q6ZMV9 814 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 CKAP2LQ8IYA6 745 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 DCTPP1Q9H773 170 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 SLIT2O94813 1529 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 RABEP1Q15276 862 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 AFF2P51816 1311 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms