RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KLRG2A4D1S0 409 aaPredicted RBP19.92■□□□□ 0.78
VAPA-201ENST00000340541 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
VAPA-201ENST00000340541 ERFEQ4G0M1 354 aa19.92■□□□□ 0.78
VAPA-201ENST00000340541 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
VAPA-201ENST00000340541 KLRG1Q96E93 195 aa19.92■□□□□ 0.78
VAPA-201ENST00000340541 WDR90Q96KV7 1748 aa19.92■□□□□ 0.78
VAPA-201ENST00000340541 FANCIQ9NVI1 1328 aa19.92■□□□□ 0.78
VAPA-201ENST00000340541 FER1L6Q2WGJ9 1857 aa19.92■□□□□ 0.78
VAPA-201ENST00000340541 GPTP24298 496 aa19.91■□□□□ 0.78
VAPA-201ENST00000340541 JMYQ8N9B5 988 aa19.91■□□□□ 0.78
VAPA-201ENST00000340541 NPR1P16066 1061 aa19.9■□□□□ 0.78
VAPA-201ENST00000340541 PRPF40BQ6NWY9 871 aaKnown RBP19.9■□□□□ 0.78
VAPA-201ENST00000340541 TAOK3Q9H2K8 898 aa19.9■□□□□ 0.78
VAPA-201ENST00000340541 HYPKQ9NX55 129 aa19.9■□□□□ 0.78
VAPA-201ENST00000340541 IBTKQ9P2D0 1353 aaPredicted RBP19.9■□□□□ 0.78
VAPA-201ENST00000340541 DICER1Q9UPY3 1922 aaKnown RBP19.9■□□□□ 0.78
VAPA-201ENST00000340541 FAM177BA6PVY3 158 aa19.89■□□□□ 0.77
VAPA-201ENST00000340541 C7orf43Q8WVR3 580 aa19.89■□□□□ 0.77
VAPA-201ENST00000340541 ABCC12Q96J65 1359 aa19.88■□□□□ 0.77
VAPA-201ENST00000340541 POTECB2RU33 542 aa19.88■□□□□ 0.77
VAPA-201ENST00000340541 SUSD4Q5VX71 490 aa19.88■□□□□ 0.77
VAPA-201ENST00000340541 MIER1Q8N108 512 aa19.88■□□□□ 0.77
VAPA-201ENST00000340541 ZNF219Q9P2Y4 722 aaPredicted RBP19.88■□□□□ 0.77
VAPA-201ENST00000340541 ARFGEF2Q9Y6D5 1785 aa19.88■□□□□ 0.77
VAPA-201ENST00000340541 TIAM2Q8IVF5 1701 aa19.88■□□□□ 0.77
VAPA-201ENST00000340541 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
VAPA-201ENST00000340541 PLBD2Q8NHP8 589 aa19.87■□□□□ 0.77
VAPA-201ENST00000340541 PHAXQ9H814 394 aaKnown RBP19.87■□□□□ 0.77
VAPA-201ENST00000340541 SLX4Q8IY92 1834 aa19.87■□□□□ 0.77
VAPA-201ENST00000340541 NTSR2O95665 410 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 ALDH1B1P30837 517 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 TCIRG1Q13488 830 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 CCDC30Q5VVM6 783 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 ANKRD13DQ6ZTN6 518 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 NYXQ9GZU5 481 aa19.86■□□□□ 0.77
VAPA-201ENST00000340541 RIC1Q4ADV7 1423 aa19.85■□□□□ 0.77
VAPA-201ENST00000340541 PARP10Q53GL7 1025 aa19.85■□□□□ 0.77
VAPA-201ENST00000340541 CCDC93Q567U6 631 aa19.85■□□□□ 0.77
VAPA-201ENST00000340541 HSP90AB3PQ58FF7 597 aa19.85■□□□□ 0.77
VAPA-201ENST00000340541 HTRA3P83110 453 aa19.84■□□□□ 0.77
VAPA-201ENST00000340541 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
VAPA-201ENST00000340541 GOLGA2Q08379 1002 aa19.84■□□□□ 0.77
VAPA-201ENST00000340541 NLRP10Q86W26 655 aa19.84■□□□□ 0.77
VAPA-201ENST00000340541 RTKN2Q8IZC4 609 aa19.84■□□□□ 0.77
VAPA-201ENST00000340541 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
VAPA-201ENST00000340541 TCERG1O14776 1098 aaKnown RBP19.83■□□□□ 0.77
VAPA-201ENST00000340541 VAMP4O75379 141 aa19.83■□□□□ 0.77
VAPA-201ENST00000340541 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
VAPA-201ENST00000340541 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
VAPA-201ENST00000340541 CACNA1SQ13698 1873 aa19.82■□□□□ 0.76
VAPA-201ENST00000340541 GTF2E1P29083 439 aaPredicted RBP19.82■□□□□ 0.76
VAPA-201ENST00000340541 FKBP4Q02790 459 aaKnown RBP eCLIP19.82■□□□□ 0.76
VAPA-201ENST00000340541 CRY2Q49AN0 593 aa19.82■□□□□ 0.76
VAPA-201ENST00000340541 PPP1R42Q7Z4L9 355 aa19.82■□□□□ 0.76
VAPA-201ENST00000340541 IQCA1LA6NCM1 817 aa19.81■□□□□ 0.76
VAPA-201ENST00000340541 UTP14AQ9BVJ6 771 aaKnown RBP19.81■□□□□ 0.76
VAPA-201ENST00000340541 DDNO94850 711 aaPredicted RBP19.8■□□□□ 0.76
VAPA-201ENST00000340541 SLC10A5Q5PT55 438 aa19.8■□□□□ 0.76
VAPA-201ENST00000340541 G2E3Q7L622 706 aa19.8■□□□□ 0.76
VAPA-201ENST00000340541 L3MBTL3Q96JM7 780 aaPredicted RBP19.8■□□□□ 0.76
VAPA-201ENST00000340541 CACNA1FO60840 1977 aa19.8■□□□□ 0.76
VAPA-201ENST00000340541 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 GRIPAP1Q4V328 841 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 CC2D2BQ6DHV5 1058 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 CHADLQ6NUI6 762 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 C3orf67Q6ZVT6 689 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 RIC3Q7Z5B4 369 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
VAPA-201ENST00000340541 LAMB2P55268 1798 aa19.78■□□□□ 0.76
VAPA-201ENST00000340541 ATP5J2-PTCD1G3V325 749 aa19.78■□□□□ 0.76
VAPA-201ENST00000340541 TRIM28Q13263 835 aaKnown RBP19.78■□□□□ 0.76
VAPA-201ENST00000340541 SYNE4Q8N205 404 aa19.78■□□□□ 0.76
VAPA-201ENST00000340541 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
VAPA-201ENST00000340541 ZNF428Q96B54 188 aa19.77■□□□□ 0.76
VAPA-201ENST00000340541 DDX60Q8IY21 1712 aaKnown RBP19.76■□□□□ 0.75
VAPA-201ENST00000340541 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
VAPA-201ENST00000340541 SLFN5Q08AF3 891 aa19.76■□□□□ 0.75
VAPA-201ENST00000340541 KSR2Q6VAB6 950 aa19.76■□□□□ 0.75
VAPA-201ENST00000340541 PSMD1Q99460 953 aa19.76■□□□□ 0.75
VAPA-201ENST00000340541 TRMT112Q9UI30 125 aaKnown RBP19.76■□□□□ 0.75
VAPA-201ENST00000340541 SH3TC1Q8TE82 1336 aa19.76■□□□□ 0.75
VAPA-201ENST00000340541 SCN4AP35499 1836 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 PI4KAP2A4QPH2 592 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 E9PSI1 815 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 DDX58O95786 925 aaKnown RBP19.75■□□□□ 0.75
VAPA-201ENST00000340541 PI4KAP1Q8N8J0 262 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 MYD88Q99836 296 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 METTL22Q9BUU2 404 aaPredicted RBP19.75■□□□□ 0.75
VAPA-201ENST00000340541 ZNF277Q9NRM2 450 aaPredicted RBP19.75■□□□□ 0.75
VAPA-201ENST00000340541 CREBZFQ9NS37 354 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 MAP3K2Q9Y2U5 619 aa19.75■□□□□ 0.75
VAPA-201ENST00000340541 FZD9O00144 591 aa19.74■□□□□ 0.75
VAPA-201ENST00000340541 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
VAPA-201ENST00000340541 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
VAPA-201ENST00000340541 FLIIQ13045 1269 aa19.74■□□□□ 0.75
VAPA-201ENST00000340541 LDHDQ86WU2 507 aa19.74■□□□□ 0.75
VAPA-201ENST00000340541 TAF1DQ9H5J8 278 aaPredicted RBP19.74■□□□□ 0.75
VAPA-201ENST00000340541 TRMT2AQ8IZ69 625 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms