RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 RABL6Q3YEC7 729 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 FOXD4L4Q8WXT5 416 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 COPRSQ9NQ92 184 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 TMEM63CQ9P1W3 806 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 JCADQ9P266 1359 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 NCLP19338 710 aaKnown RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
ARHGEF1-201ENST00000337665 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-201ENST00000337665 HIP1O00291 1037 aa17.37■□□□□ 0.37
ARHGEF1-201ENST00000337665 CASP7P55210 303 aa17.37■□□□□ 0.37
ARHGEF1-201ENST00000337665 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
ARHGEF1-201ENST00000337665 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
ARHGEF1-201ENST00000337665 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
ARHGEF1-201ENST00000337665 MBD3O95983 291 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 CLCN1P35523 988 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 NMIQ13287 307 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 PTPN12Q05209 780 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 PRPF40BQ6NWY9 871 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 SIL1Q9H173 461 aa17.36■□□□□ 0.37
ARHGEF1-201ENST00000337665 CPA1P15085 419 aa17.35■□□□□ 0.37
ARHGEF1-201ENST00000337665 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
ARHGEF1-201ENST00000337665 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-201ENST00000337665 PRIM1P49642 420 aaKnown RBP17.35■□□□□ 0.37
ARHGEF1-201ENST00000337665 CABP4P57796 275 aa17.35■□□□□ 0.37
ARHGEF1-201ENST00000337665 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
ARHGEF1-201ENST00000337665 LARGE1O95461 756 aa17.34■□□□□ 0.37
ARHGEF1-201ENST00000337665 TMEM87AQ8NBN3 555 aa17.34■□□□□ 0.37
ARHGEF1-201ENST00000337665 PLBD2Q8NHP8 589 aa17.34■□□□□ 0.37
ARHGEF1-201ENST00000337665 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
ARHGEF1-201ENST00000337665 LRSAM1Q6UWE0 723 aa17.34■□□□□ 0.37
ARHGEF1-201ENST00000337665 RBM8AQ9Y5S9 174 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-201ENST00000337665 A0A0D9SFI3 127 aa17.33■□□□□ 0.37
ARHGEF1-201ENST00000337665 BRINP3Q76B58 766 aa17.33■□□□□ 0.37
ARHGEF1-201ENST00000337665 JAKMIP1Q96N16 626 aaKnown RBP17.33■□□□□ 0.37
ARHGEF1-201ENST00000337665 BOLA2Q9H3K6 86 aa17.33■□□□□ 0.37
ARHGEF1-201ENST00000337665 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.37
ARHGEF1-201ENST00000337665 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.37
ARHGEF1-201ENST00000337665 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
ARHGEF1-201ENST00000337665 COL5A2P05997 1499 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF1-201ENST00000337665 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 ATP5JP18859 108 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 ST3GAL1Q11201 340 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 ZSCAN31Q96LW9 406 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 CYP46A1Q9Y6A2 500 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 STRCQ7RTU9 1775 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 TNNI3KQ59H18 835 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 DBNLQ9UJU6 430 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 FPGT-TNNI3KV9GXZ4 949 aa17.32■□□□□ 0.36
ARHGEF1-201ENST00000337665 ESPNB1AK53 854 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 SLC27A2O14975 620 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 SYT1P21579 422 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 UBE3BQ7Z3V4 1068 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 ALDH8A1Q9H2A2 487 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 SH2B1Q9NRF2 756 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 RFX7Q2KHR2 1363 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 TFCP2Q12800 502 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 USP48Q86UV5 1035 aa17.31■□□□□ 0.36
ARHGEF1-201ENST00000337665 H7C1W4 665 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 STX6O43752 255 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 TSGA10IPQ3SY00 556 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 ERVV-2B6SEH9 535 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 GADD45BO75293 160 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 FOXO4P98177 505 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 FSD1Q9BTV5 496 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 A0A087WZG4 1122 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 SYCE3A1L190 88 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 PDLIM2Q96JY6 352 aa17.3■□□□□ 0.36
ARHGEF1-201ENST00000337665 SOS2Q07890 1332 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-201ENST00000337665 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-201ENST00000337665 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
ARHGEF1-201ENST00000337665 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-201ENST00000337665 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
ARHGEF1-201ENST00000337665 ME3Q16798 604 aa17.28■□□□□ 0.36
ARHGEF1-201ENST00000337665 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms