RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 V9GYY5 206 aaPredicted RBP9.74□□□□□ -0.85
HPS4-201ENST00000336873 GOLGA6L6A8MZA4 724 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 CCDC192P0DO97 292 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 TTLL5Q6EMB2 1281 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 KSR2Q6VAB6 950 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 ZDHHC9Q9Y397 364 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 ZFYVE9O95405 1425 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 CBX1P83916 185 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 CCDC57Q2TAC2 916 aa9.74□□□□□ -0.85
HPS4-201ENST00000336873 LARP1Q6PKG0 1096 aaKnown RBP9.74□□□□□ -0.85
HPS4-201ENST00000336873 SGSM2O43147 1006 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 SMC2O95347 1197 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 TPD52L1Q16890 204 aaPredicted RBP9.73□□□□□ -0.85
HPS4-201ENST00000336873 ERC1Q8IUD2 1116 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
HPS4-201ENST00000336873 MAP3K5Q99683 1374 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 A0A0D9SFI3 127 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 IFIT1P09914 478 aaKnown RBP9.73□□□□□ -0.85
HPS4-201ENST00000336873 TRDNQ13061 729 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 CREB3L3Q68CJ9 461 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 KCNH5Q8NCM2 988 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 QRICH2Q9H0J4 1663 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 F13A1P00488 732 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 APOBRQ0VD83 1088 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 ME3Q16798 604 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 CDC37L1Q7L3B6 337 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 HOMER1Q86YM7 354 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
HPS4-201ENST00000336873 RNMTO43148 476 aaKnown RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 KINO60870 393 aaKnown RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 Q6ZUG5 572 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 PAXIP1Q6ZW49 1069 aaPredicted RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 RUFY3Q7L099 469 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 EVI5LQ96CN4 794 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 SRCAPQ6ZRS2 3230 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 HTATSF1O43719 755 aaKnown RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 STK38Q15208 465 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 MAP3K11Q16584 847 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 CCDC183Q5T5S1 534 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 NUP133Q8WUM0 1156 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 FAM89AQ96GI7 184 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 ABCF2Q9UG63 623 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
HPS4-201ENST00000336873 GLI2P10070 1586 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 RAD21O60216 631 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
HPS4-201ENST00000336873 RASSF8Q8NHQ8 419 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 FTOQ9C0B1 505 aaKnown RBP eCLIP9.72□□□□□ -0.85
HPS4-201ENST00000336873 KIDINS220Q9ULH0 1771 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
HPS4-201ENST00000336873 LRRC7Q96NW7 1537 aa9.71□□□□□ -0.85
HPS4-201ENST00000336873 PDILTQ8N807 584 aa9.71□□□□□ -0.85
HPS4-201ENST00000336873 IP6K1Q92551 441 aa9.71□□□□□ -0.85
HPS4-201ENST00000336873 PTPN21Q16825 1174 aa9.71□□□□□ -0.85
HPS4-201ENST00000336873 AKAP4Q5JQC9 854 aa9.71□□□□□ -0.85
HPS4-201ENST00000336873 NEK1Q96PY6 1258 aa9.71□□□□□ -0.85
HPS4-201ENST00000336873 ADGRB1O14514 1584 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 PDCP20941 246 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 ANO6Q4KMQ2 910 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 ZNF790Q6PG37 636 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 CCDC186Q7Z3E2 898 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 HYPKQ9NX55 129 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 DIP2CQ9Y2E4 1556 aa9.71□□□□□ -0.86
HPS4-201ENST00000336873 BEND3Q5T5X7 828 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
HPS4-201ENST00000336873 LINS1Q8NG48 757 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 NRXN1Q9ULB1 1477 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 GIGYF1O75420 1035 aaPredicted RBP9.7□□□□□ -0.86
HPS4-201ENST00000336873 BRD1O95696 1058 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 MARCKSP29966 332 aaPredicted RBP9.7□□□□□ -0.86
HPS4-201ENST00000336873 ZNF165P49910 485 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 MICU3Q86XE3 530 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 TPCN1Q9ULQ1 816 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 TAF6LQ9Y6J9 622 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 ADAMTS2O95450 1211 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 UBE2HP62256 183 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 METTL24Q5JXM2 366 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 CCDC158Q5M9N0 1113 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 JAG2Q9Y219 1238 aa9.7□□□□□ -0.86
HPS4-201ENST00000336873 PPLO60437 1756 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 LMTK2Q8IWU2 1503 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 LIG1P18858 919 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 PTGS1P23219 599 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 HSPA4P34932 840 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 VPS37DQ86XT2 251 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 SSH3Q8TE77 659 aa9.69□□□□□ -0.86
HPS4-201ENST00000336873 ZKSCAN5Q9Y2L8 839 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms