RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ANKRD2Q9GZV1 360 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 CHMP5Q9NZZ3 219 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 SKOR2Q2VWA4 1001 aaPredicted RBP11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 BLOC1S2Q6QNY1 142 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 CRB1P82279 1406 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 NUCB1Q02818 461 aa11.08□□□□□ -0.63
FNDC3B-201ENST00000336824 PHAXQ9H814 394 aaKnown RBP11.08□□□□□ -0.63
FNDC3B-201ENST00000336824 KDM4FA0A1W2PPD8 638 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 USP5P45974 858 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 GSTO1P78417 241 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 BAG3O95817 575 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 HOOK1Q9UJC3 728 aaKnown RBP11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 RBM17Q96I25 401 aaKnown RBP11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 NAPBQ9H115 298 aa11.08□□□□□ -0.64
FNDC3B-201ENST00000336824 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 BMP2KLQ5H9B9 411 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 ZNF804AQ7Z570 1209 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 KRT27Q7Z3Y8 459 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 BACH2Q9BYV9 841 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 CDKL5O76039 1030 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 A1BGP04217 495 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 OVOS2A0A0J9YW53 1432 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 OVOS2Q6IE36 1432 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 PDE8AO60658 829 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 FOXD4L5Q5VV16 416 aaPredicted RBP11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 FOXD4L4Q8WXT5 416 aaPredicted RBP11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
FNDC3B-201ENST00000336824 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 LOC102724428A0A0B4J2F2 783 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 SIK1P57059 783 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 CEP85Q6P2H3 762 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 BICC1Q9H694 974 aaKnown RBP11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 CLSTN1O94985 981 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 USP19O94966 1318 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 RNF41Q9H4P4 317 aaPredicted RBP11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
FNDC3B-201ENST00000336824 KDRP35968 1356 aa11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 POLR3DP05423 398 aaPredicted RBP11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 EYA3Q99504 573 aa11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 ATP2B2Q01814 1243 aa11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 PNPLA6Q8IY17 1366 aa11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 GOLIM4O00461 696 aa11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 CCDC47Q96A33 483 aaKnown RBP11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 AFF2P51816 1311 aa11.05□□□□□ -0.64
FNDC3B-201ENST00000336824 G2E3Q7L622 706 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 TTC22Q5TAA0 569 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 DCTPP1Q9H773 170 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 MYO1BO43795 1136 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 CRACR2BQ8N4Y2 399 aaPredicted RBP11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 ZC3H12CQ9C0D7 883 aaKnown RBP11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 PCDHB15Q9Y5E8 787 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
FNDC3B-201ENST00000336824 IL6STP40189 918 aaPredicted RBP11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 CCAR1Q8IX12 1150 aaKnown RBP11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 SEPT12Q8IYM1 358 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 ZNF213O14771 459 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 PDRG1Q9NUG6 133 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 SOS2Q07890 1332 aaPredicted RBP11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 GCKRQ14397 625 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 FAM89AQ96GI7 184 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 RLBP1P12271 317 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
FNDC3B-201ENST00000336824 HEG1Q9ULI3 1381 aa11.02□□□□□ -0.64
FNDC3B-201ENST00000336824 IQCA1Q86XH1 822 aa11.02□□□□□ -0.64
FNDC3B-201ENST00000336824 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 IGHDP01880 384 aa11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 WASF1Q92558 559 aa11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 DDX49Q9Y6V7 483 aaKnown RBP11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 OGFOD1Q8N543 542 aa11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 MAP3K15Q6ZN16 1313 aa11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 MINDY4BA8MYZ0 360 aa11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 RBM6P78332 1123 aaKnown RBP11.02□□□□□ -0.65
FNDC3B-201ENST00000336824 CCDC196A0A1B0GTZ2 297 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 NEURL1BA8MQ27 555 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 H0YIN7 160 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms