RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ADAMTSL3P82987 1691 aa16.67■□□□□ 0.26
SF1-202ENST00000334944 CYP27B1O15528 508 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 GTPBP4Q9BZE4 634 aaKnown RBP16.66■□□□□ 0.26
SF1-202ENST00000334944 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
SF1-202ENST00000334944 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 SGSM2O43147 1006 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 LINS1Q8NG48 757 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
SF1-202ENST00000334944 KIF20AO95235 890 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 ZNF771Q7L3S4 317 aaPredicted RBP16.66■□□□□ 0.26
SF1-202ENST00000334944 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
SF1-202ENST00000334944 SLIT3O75094 1523 aa16.65■□□□□ 0.26
SF1-202ENST00000334944 MEGF6O75095 1541 aa16.65■□□□□ 0.26
SF1-202ENST00000334944 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
SF1-202ENST00000334944 SASH1O94885 1247 aa16.65■□□□□ 0.26
SF1-202ENST00000334944 PTH1RQ03431 593 aa16.65■□□□□ 0.26
SF1-202ENST00000334944 EAF2Q96CJ1 260 aaPredicted RBP16.65■□□□□ 0.26
SF1-202ENST00000334944 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
SF1-202ENST00000334944 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
SF1-202ENST00000334944 ALDH1L1O75891 902 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
SF1-202ENST00000334944 HSPA4P34932 840 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
SF1-202ENST00000334944 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
SF1-202ENST00000334944 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 FAM227BQ96M60 508 aa16.64■□□□□ 0.25
SF1-202ENST00000334944 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
SF1-202ENST00000334944 GLRX3O76003 335 aaKnown RBP16.63■□□□□ 0.25
SF1-202ENST00000334944 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.255e-7■□□□□ 9.3
SF1-202ENST00000334944 AOX1Q06278 1338 aa16.63■□□□□ 0.25
SF1-202ENST00000334944 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
SF1-202ENST00000334944 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 RAD50Q92878 1312 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 NEURL1BA8MQ27 555 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 CHGBP05060 677 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
SF1-202ENST00000334944 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 NEXNQ0ZGT2 675 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 MTX1Q13505 466 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 NCAPD2Q15021 1401 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
SF1-202ENST00000334944 CLEC17AQ6ZS10 378 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
SF1-202ENST00000334944 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 MST1RQ04912 1400 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 TRPM3Q9HCF6 1732 aaPredicted RBP16.61■□□□□ 0.25
SF1-202ENST00000334944 AK2P54819 239 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 CABP4P57796 275 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 ANAPC15P60006 121 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 GCKRQ14397 625 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.25
SF1-202ENST00000334944 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
SF1-202ENST00000334944 MCM5P33992 734 aa16.6■□□□□ 0.25
SF1-202ENST00000334944 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
SF1-202ENST00000334944 LARP1Q6PKG0 1096 aaKnown RBP16.6■□□□□ 0.25
SF1-202ENST00000334944 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
SF1-202ENST00000334944 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
SF1-202ENST00000334944 LARGE1O95461 756 aa16.59■□□□□ 0.25
SF1-202ENST00000334944 KCNJ4P48050 445 aa16.59■□□□□ 0.25
SF1-202ENST00000334944 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
SF1-202ENST00000334944 CUL4AQ13619 759 aa16.59■□□□□ 0.25
SF1-202ENST00000334944 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
SF1-202ENST00000334944 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.25
SF1-202ENST00000334944 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
SF1-202ENST00000334944 RUFY3Q7L099 469 aa16.58■□□□□ 0.24
SF1-202ENST00000334944 IPO4Q8TEX9 1081 aaKnown RBP16.58■□□□□ 0.24
SF1-202ENST00000334944 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
SF1-202ENST00000334944 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
SF1-202ENST00000334944 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
SF1-202ENST00000334944 NMIQ13287 307 aaPredicted RBP16.58■□□□□ 0.24
SF1-202ENST00000334944 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
SF1-202ENST00000334944 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
SF1-202ENST00000334944 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
SF1-202ENST00000334944 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
SF1-202ENST00000334944 MCM2P49736 904 aa16.57■□□□□ 0.24
SF1-202ENST00000334944 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
SF1-202ENST00000334944 A0A087WZG4 1122 aa16.57■□□□□ 0.24
SF1-202ENST00000334944 BRD1O95696 1058 aa16.57■□□□□ 0.24
SF1-202ENST00000334944 DCAF5Q96JK2 942 aa16.57■□□□□ 0.24
SF1-202ENST00000334944 FSD1Q9BTV5 496 aa16.57■□□□□ 0.24
SF1-202ENST00000334944 A0A0D9SFI3 127 aa16.56■□□□□ 0.24
SF1-202ENST00000334944 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
SF1-202ENST00000334944 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
SF1-202ENST00000334944 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
SF1-202ENST00000334944 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
SF1-202ENST00000334944 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
SF1-202ENST00000334944 NECAB1Q8N987 351 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms