RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 COPS6Q7L5N1 327 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 KLHDC4Q8TBB5 520 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 ZKSCAN1P17029 563 aaPredicted RBP28.07■■■□□ 2.08
NDEL1-201ENST00000334527 MSNP26038 577 aaKnown RBP28.07■■■□□ 2.08
NDEL1-201ENST00000334527 GCKRQ14397 625 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 CCDC83Q8IWF9 413 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 TMEM87AQ8NBN3 555 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 MYD88Q99836 296 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 TSPY26PQ9H489 355 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 CNPY2Q9Y2B0 182 aa28.07■■■□□ 2.08
NDEL1-201ENST00000334527 RBM8AQ9Y5S9 174 aaKnown RBP28.07■■■□□ 2.08
NDEL1-201ENST00000334527 RNF214Q8ND24 703 aa28.06■■■□□ 2.08
NDEL1-201ENST00000334527 KCNJ4P48050 445 aa28.06■■■□□ 2.08
NDEL1-201ENST00000334527 BOLA2Q9H3K6 86 aa28.06■■■□□ 2.08
NDEL1-201ENST00000334527 PHF14O94880 888 aa28.05■■■□□ 2.08
NDEL1-201ENST00000334527 ZNF496Q96IT1 587 aaPredicted RBP28.05■■■□□ 2.08
NDEL1-201ENST00000334527 ZSCAN31Q96LW9 406 aaPredicted RBP28.05■■■□□ 2.08
NDEL1-201ENST00000334527 METTL22Q9BUU2 404 aaPredicted RBP28.05■■■□□ 2.08
NDEL1-201ENST00000334527 MEGF6O75095 1541 aa28.05■■■□□ 2.08
NDEL1-201ENST00000334527 CREB3L3Q68CJ9 461 aa28.04■■■□□ 2.08
NDEL1-201ENST00000334527 F13A1P00488 732 aa28.04■■■□□ 2.08
NDEL1-201ENST00000334527 EPHA10Q5JZY3 1008 aa28.04■■■□□ 2.08
NDEL1-201ENST00000334527 MAP4K1Q92918 833 aa28.04■■■□□ 2.08
NDEL1-201ENST00000334527 SH2B1Q9NRF2 756 aaPredicted RBP28.04■■■□□ 2.08
NDEL1-201ENST00000334527 GJB2P29033 226 aa28.03■■■□□ 2.08
NDEL1-201ENST00000334527 DDX54Q8TDD1 881 aaKnown RBP28.03■■■□□ 2.08
NDEL1-201ENST00000334527 FSD1Q9BTV5 496 aa28.03■■■□□ 2.08
NDEL1-201ENST00000334527 IFNL2Q8IZJ0 200 aa28.03■■■□□ 2.08
NDEL1-201ENST00000334527 DDX17Q92841 729 aaKnown RBP28.02■■■□□ 2.08
NDEL1-201ENST00000334527 CSB-PGBD3P0DP91 1061 aa28.02■■■□□ 2.08
NDEL1-201ENST00000334527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.084e-8■□□□□ 10.7
NDEL1-201ENST00000334527 A0A0D9SFI3 127 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 ANKRD13DQ6ZTN6 518 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 ATP6V1DQ9Y5K8 247 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 MRC1P22897 1456 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 TTC5Q8N0Z6 440 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 SNRKQ9NRH2 765 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 USP16Q9Y5T5 823 aa28.01■■■□□ 2.07
NDEL1-201ENST00000334527 PIP4K2AP48426 406 aaPredicted RBP28■■■□□ 2.07
NDEL1-201ENST00000334527 SLC27A2O14975 620 aa28■■■□□ 2.07
NDEL1-201ENST00000334527 DTNBO60941 627 aa28■■■□□ 2.07
NDEL1-201ENST00000334527 SNRPA1P09661 255 aaKnown RBP28■■■□□ 2.07
NDEL1-201ENST00000334527 NOL7Q9UMY1 257 aaKnown RBP28■■■□□ 2.07
NDEL1-201ENST00000334527 ME3Q16798 604 aa27.99■■■□□ 2.07
NDEL1-201ENST00000334527 LRP10Q7Z4F1 713 aa27.99■■■□□ 2.07
NDEL1-201ENST00000334527 JARID2Q92833 1246 aaPredicted RBP27.99■■■□□ 2.07
NDEL1-201ENST00000334527 ATF3P18847 181 aa27.98■■■□□ 2.07
NDEL1-201ENST00000334527 UBE2HP62256 183 aa27.98■■■□□ 2.07
NDEL1-201ENST00000334527 ST3GAL1Q11201 340 aa27.98■■■□□ 2.07
NDEL1-201ENST00000334527 TPRNQ4KMQ1 711 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 CCDC183Q5T5S1 534 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 DCAF5Q96JK2 942 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 MTMR6Q9Y217 621 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 COL18A1P39060 1754 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 FIBPO43427 364 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 PSMA5P28066 241 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 NECAB1Q8N987 351 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 MED23Q9ULK4 1368 aa27.97■■■□□ 2.07
NDEL1-201ENST00000334527 CABLES1Q8TDN4 633 aa27.96■■■□□ 2.07
NDEL1-201ENST00000334527 TPCN1Q9ULQ1 816 aa27.96■■■□□ 2.07
NDEL1-201ENST00000334527 CYP27B1O15528 508 aa27.96■■■□□ 2.07
NDEL1-201ENST00000334527 FMNL2Q96PY5 1086 aa27.96■■■□□ 2.07
NDEL1-201ENST00000334527 COPRSQ9NQ92 184 aa27.96■■■□□ 2.07
NDEL1-201ENST00000334527 CHRNA2Q15822 529 aa27.95■■■□□ 2.07
NDEL1-201ENST00000334527 RNF20Q5VTR2 975 aa27.95■■■□□ 2.07
NDEL1-201ENST00000334527 AFDNP55196 1824 aaKnown RBP27.95■■■□□ 2.06
NDEL1-201ENST00000334527 ABCC6O95255 1503 aa27.95■■■□□ 2.06
NDEL1-201ENST00000334527 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.95■■■□□ 2.06
NDEL1-201ENST00000334527 COL9A3Q14050 684 aaPredicted RBP27.94■■■□□ 2.06
NDEL1-201ENST00000334527 RFX5P48382 616 aaPredicted RBP27.94■■■□□ 2.06
NDEL1-201ENST00000334527 UBE3BQ7Z3V4 1068 aa27.94■■■□□ 2.06
NDEL1-201ENST00000334527 ZNF589Q86UQ0 364 aaPredicted RBP27.94■■■□□ 2.06
NDEL1-201ENST00000334527 EDC3Q96F86 508 aaKnown RBP27.94■■■□□ 2.06
NDEL1-201ENST00000334527 CCDC39Q9UFE4 941 aa27.94■■■□□ 2.06
NDEL1-201ENST00000334527 VPS37CA5D8V6 355 aaPredicted RBP27.93■■■□□ 2.06
NDEL1-201ENST00000334527 DNM1Q05193 864 aaKnown RBP27.93■■■□□ 2.06
NDEL1-201ENST00000334527 PTPN12Q05209 780 aaKnown RBP27.93■■■□□ 2.06
NDEL1-201ENST00000334527 TFCP2Q12800 502 aa27.93■■■□□ 2.06
NDEL1-201ENST00000334527 BLOC1S2Q6QNY1 142 aa27.93■■■□□ 2.06
NDEL1-201ENST00000334527 DBNLQ9UJU6 430 aaKnown RBP27.93■■■□□ 2.06
NDEL1-201ENST00000334527 TNNI3KQ59H18 835 aa27.92■■■□□ 2.06
NDEL1-201ENST00000334527 FPGT-TNNI3KV9GXZ4 949 aa27.92■■■□□ 2.06
NDEL1-201ENST00000334527 OFD1O75665 1012 aa27.92■■■□□ 2.06
NDEL1-201ENST00000334527 CSPP1Q1MSJ5 1256 aa27.92■■■□□ 2.06
NDEL1-201ENST00000334527 TAF6LQ9Y6J9 622 aa27.92■■■□□ 2.06
NDEL1-201ENST00000334527 ARFGEF2Q9Y6D5 1785 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 ATP5J2-PTCD1G3V325 749 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 PTCD1O75127 700 aaKnown RBP27.91■■■□□ 2.06
NDEL1-201ENST00000334527 LETM1O95202 739 aaPredicted RBP27.91■■■□□ 2.06
NDEL1-201ENST00000334527 ATP5JP18859 108 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 ZKSCAN5Q9Y2L8 839 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 TMEM94Q12767 1356 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 CABP4P57796 275 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 RABL6Q3YEC7 729 aaPredicted RBP27.91■■■□□ 2.06
NDEL1-201ENST00000334527 TCEANC2Q96MN5 208 aa27.91■■■□□ 2.06
NDEL1-201ENST00000334527 JCADQ9P266 1359 aa27.9■■■□□ 2.06
NDEL1-201ENST00000334527 RPS6KB1P23443 525 aa27.9■■■□□ 2.06
NDEL1-201ENST00000334527 ANKRD1Q15327 319 aa27.9■■■□□ 2.06
NDEL1-201ENST00000334527 FAM184AQ8NB25 1140 aa27.9■■■□□ 2.06
NDEL1-201ENST00000334527 PKD1L3Q7Z443 1732 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms