RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SLC51AQ86UW1 340 aa19.17■□□□□ 0.66
TSPO-201ENST00000329563 IBTKQ9P2D0 1353 aaPredicted RBP19.17■□□□□ 0.66
TSPO-201ENST00000329563 SNED1Q8TER0 1413 aa19.17■□□□□ 0.66
TSPO-201ENST00000329563 C3orf67Q6ZVT6 689 aa19.16■□□□□ 0.66
TSPO-201ENST00000329563 NYXQ9GZU5 481 aa19.16■□□□□ 0.66
TSPO-201ENST00000329563 RIC1Q4ADV7 1423 aa19.16■□□□□ 0.66
TSPO-201ENST00000329563 ZNF853P0CG23 659 aa19.15■□□□□ 0.66
TSPO-201ENST00000329563 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
TSPO-201ENST00000329563 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
TSPO-201ENST00000329563 CFAP44Q96MT7 982 aa19.15■□□□□ 0.66
TSPO-201ENST00000329563 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
TSPO-201ENST00000329563 ALDH1B1P30837 517 aa19.14■□□□□ 0.65
TSPO-201ENST00000329563 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
TSPO-201ENST00000329563 CHPF2Q9P2E5 772 aa19.14■□□□□ 0.65
TSPO-201ENST00000329563 SCN4AP35499 1836 aa19.14■□□□□ 0.65
TSPO-201ENST00000329563 IQCA1LA6NCM1 817 aa19.13■□□□□ 0.65
TSPO-201ENST00000329563 POTECB2RU33 542 aa19.13■□□□□ 0.65
TSPO-201ENST00000329563 AIMP1Q12904 312 aaKnown RBP19.13■□□□□ 0.65
TSPO-201ENST00000329563 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
TSPO-201ENST00000329563 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
TSPO-201ENST00000329563 DDX21Q9NR30 783 aaKnown RBP eCLIP19.13■□□□□ 0.65
TSPO-201ENST00000329563 LAMB2P55268 1798 aa19.13■□□□□ 0.65
TSPO-201ENST00000329563 PCNTO95613 3336 aa19.12■□□□□ 0.65
TSPO-201ENST00000329563 HTRA3P83110 453 aa19.11■□□□□ 0.65
TSPO-201ENST00000329563 FKBP4Q02790 459 aaKnown RBP eCLIP19.11■□□□□ 0.65
TSPO-201ENST00000329563 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
TSPO-201ENST00000329563 HOXA10P31260 410 aaPredicted RBP19.1■□□□□ 0.65
TSPO-201ENST00000329563 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
TSPO-201ENST00000329563 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
TSPO-201ENST00000329563 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
TSPO-201ENST00000329563 COL4A5P29400 1685 aa19.1■□□□□ 0.65
TSPO-201ENST00000329563 HOXB7P09629 217 aa19.09■□□□□ 0.65
TSPO-201ENST00000329563 PARP10Q53GL7 1025 aa19.09■□□□□ 0.65
TSPO-201ENST00000329563 NLRP10Q86W26 655 aa19.09■□□□□ 0.65
TSPO-201ENST00000329563 ZNF277Q9NRM2 450 aaPredicted RBP19.09■□□□□ 0.65
TSPO-201ENST00000329563 IFT57Q9NWB7 429 aa19.09■□□□□ 0.65
TSPO-201ENST00000329563 CC2D2BQ6DHV5 1058 aa19.08■□□□□ 0.64
TSPO-201ENST00000329563 CHADLQ6NUI6 762 aa19.08■□□□□ 0.64
TSPO-201ENST00000329563 PPP1R42Q7Z4L9 355 aa19.08■□□□□ 0.64
TSPO-201ENST00000329563 DDNO94850 711 aaPredicted RBP19.07■□□□□ 0.64
TSPO-201ENST00000329563 TCIRG1Q13488 830 aa19.07■□□□□ 0.64
TSPO-201ENST00000329563 GRIPAP1Q4V328 841 aa19.07■□□□□ 0.64
TSPO-201ENST00000329563 SLC10A5Q5PT55 438 aa19.07■□□□□ 0.64
TSPO-201ENST00000329563 RPGRQ92834 1020 aaKnown RBP19.07■□□□□ 0.64
TSPO-201ENST00000329563 UTP14AQ9BVJ6 771 aaKnown RBP19.07■□□□□ 0.64
TSPO-201ENST00000329563 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
TSPO-201ENST00000329563 ELL2O00472 640 aaPredicted RBP19.06■□□□□ 0.64
TSPO-201ENST00000329563 C8orf58Q8NAV2 365 aa19.06■□□□□ 0.64
TSPO-201ENST00000329563 L3MBTL3Q96JM7 780 aaPredicted RBP19.06■□□□□ 0.64
TSPO-201ENST00000329563 DBF4Q9UBU7 674 aaPredicted RBP19.06■□□□□ 0.64
TSPO-201ENST00000329563 ZNF541Q9H0D2 1346 aa19.05■□□□□ 0.64
TSPO-201ENST00000329563 COL4A1P02462 1669 aa19.05■□□□□ 0.64
TSPO-201ENST00000329563 GNAI1P63096 354 aa19.05■□□□□ 0.64
TSPO-201ENST00000329563 PLBD2Q8NHP8 589 aa19.05■□□□□ 0.64
TSPO-201ENST00000329563 CRAMP1Q96RY5 1269 aa19.05■□□□□ 0.64
TSPO-201ENST00000329563 TMX4Q9H1E5 349 aaPredicted RBP19.05■□□□□ 0.64
TSPO-201ENST00000329563 HCLS1P14317 486 aaPredicted RBP19.04■□□□□ 0.64
TSPO-201ENST00000329563 TAF1P21675 1872 aa19.04■□□□□ 0.64
TSPO-201ENST00000329563 IARSP41252 1262 aaKnown RBP19.04■□□□□ 0.64
TSPO-201ENST00000329563 HSP90AB3PQ58FF7 597 aa19.04■□□□□ 0.64
TSPO-201ENST00000329563 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
TSPO-201ENST00000329563 LDHDQ86WU2 507 aa19.04■□□□□ 0.64
TSPO-201ENST00000329563 JDP2Q8WYK2 163 aa19.04■□□□□ 0.64
TSPO-201ENST00000329563 PSMD1Q99460 953 aa19.04■□□□□ 0.64
TSPO-201ENST00000329563 PHAXQ9H814 394 aaKnown RBP19.04■□□□□ 0.64
TSPO-201ENST00000329563 TCERG1O14776 1098 aaKnown RBP19.03■□□□□ 0.64
TSPO-201ENST00000329563 TSPYL6Q8N831 410 aa19.03■□□□□ 0.64
TSPO-201ENST00000329563 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
TSPO-201ENST00000329563 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
TSPO-201ENST00000329563 ISCA1Q9BUE6 129 aa19.03■□□□□ 0.64
TSPO-201ENST00000329563 CREBZFQ9NS37 354 aa19.03■□□□□ 0.64
TSPO-201ENST00000329563 ABCC4O15439 1325 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 RNF123Q5XPI4 1314 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 ATP5J2-PTCD1G3V325 749 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 PPEF1O14829 653 aaPredicted RBP19.02■□□□□ 0.64
TSPO-201ENST00000329563 POTEIP0CG38 1075 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 POTEJP0CG39 1038 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 TSR2Q969E8 191 aaKnown RBP19.02■□□□□ 0.64
TSPO-201ENST00000329563 HYPKQ9NX55 129 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 TRMT112Q9UI30 125 aaKnown RBP19.02■□□□□ 0.64
TSPO-201ENST00000329563 HACL1Q9UJ83 578 aa19.02■□□□□ 0.64
TSPO-201ENST00000329563 CALD1Q05682 793 aaKnown RBP19.01■□□□□ 0.63
TSPO-201ENST00000329563 PNMA8AQ86V59 439 aaPredicted RBP19.01■□□□□ 0.63
TSPO-201ENST00000329563 TAF1DQ9H5J8 278 aaPredicted RBP19.01■□□□□ 0.63
TSPO-201ENST00000329563 SH3TC1Q8TE82 1336 aa19■□□□□ 0.63
TSPO-201ENST00000329563 FZD9O00144 591 aa19■□□□□ 0.63
TSPO-201ENST00000329563 WWC1Q8IX03 1113 aa19■□□□□ 0.63
TSPO-201ENST00000329563 GPC2Q8N158 579 aa19■□□□□ 0.63
TSPO-201ENST00000329563 EIF6P56537 245 aaKnown RBP18.99■□□□□ 0.63
TSPO-201ENST00000329563 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
TSPO-201ENST00000329563 FAM89AQ96GI7 184 aa18.99■□□□□ 0.63
TSPO-201ENST00000329563 LRRC37AA6NMS7 1700 aa18.98■□□□□ 0.63
TSPO-201ENST00000329563 LTBP1Q14766 1721 aa18.98■□□□□ 0.63
TSPO-201ENST00000329563 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
TSPO-201ENST00000329563 EAPPQ56P03 285 aaPredicted RBP18.98■□□□□ 0.63
TSPO-201ENST00000329563 CLEC11AQ9Y240 323 aa18.98■□□□□ 0.63
TSPO-201ENST00000329563 ATP6V0A2Q9Y487 856 aa18.98■□□□□ 0.63
TSPO-201ENST00000329563 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
TSPO-201ENST00000329563 DUOX1Q9NRD9 1551 aa18.98■□□□□ 0.63
TSPO-201ENST00000329563 LMOD1P29536 600 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms