RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 C4AP0C0L4 1744 aa15.87■□□□□ 0.13
DDX39A-202ENST00000324340 POLA2Q14181 598 aa15.87■□□□□ 0.13
DDX39A-202ENST00000324340 TXNRD1Q16881 649 aa15.87■□□□□ 0.13
DDX39A-202ENST00000324340 PROM2Q8N271 834 aa15.87■□□□□ 0.13
DDX39A-202ENST00000324340 SUCLG2Q96I99 432 aa15.87■□□□□ 0.13
DDX39A-202ENST00000324340 UBR3Q6ZT12 1888 aa15.86■□□□□ 0.13
DDX39A-202ENST00000324340 PNMA6EA0A0J9YXQ4 647 aa15.86■□□□□ 0.13
DDX39A-202ENST00000324340 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
DDX39A-202ENST00000324340 ARXQ96QS3 562 aa15.86■□□□□ 0.13
DDX39A-202ENST00000324340 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
DDX39A-202ENST00000324340 GNPATO15228 680 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 APBA3O96018 575 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 NUCB1Q02818 461 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
DDX39A-202ENST00000324340 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 NLRP10Q86W26 655 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
DDX39A-202ENST00000324340 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-202ENST00000324340 ADRA2BP18089 450 aa15.84■□□□□ 0.13
DDX39A-202ENST00000324340 BICC1Q9H694 974 aaKnown RBP15.84■□□□□ 0.13
DDX39A-202ENST00000324340 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
DDX39A-202ENST00000324340 ZNF652Q9Y2D9 606 aa15.84■□□□□ 0.13
DDX39A-202ENST00000324340 UBN2Q6ZU65 1347 aa15.83■□□□□ 0.12
DDX39A-202ENST00000324340 CDHR2Q9BYE9 1310 aa15.83■□□□□ 0.12
DDX39A-202ENST00000324340 AMIGO3Q86WK7 504 aa15.83■□□□□ 0.12
DDX39A-202ENST00000324340 ZBTB38Q8NAP3 1195 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-202ENST00000324340 AK7Q96M32 723 aa15.83■□□□□ 0.12
DDX39A-202ENST00000324340 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
DDX39A-202ENST00000324340 EPHA10Q5JZY3 1008 aa15.82■□□□□ 0.12
DDX39A-202ENST00000324340 IL27Q8NEV9 243 aa15.82■□□□□ 0.12
DDX39A-202ENST00000324340 PLA2G12BQ9BX93 195 aa15.82■□□□□ 0.12
DDX39A-202ENST00000324340 COL24A1Q17RW2 1714 aa15.81■□□□□ 0.12
DDX39A-202ENST00000324340 FOXO4P98177 505 aa15.81■□□□□ 0.12
DDX39A-202ENST00000324340 PARP10Q53GL7 1025 aa15.81■□□□□ 0.12
DDX39A-202ENST00000324340 CHD1LQ86WJ1 897 aa15.81■□□□□ 0.12
DDX39A-202ENST00000324340 ARHGEF1Q92888 912 aaKnown RBP15.81■□□□□ 0.12
DDX39A-202ENST00000324340 BCL2L12Q9HB09 334 aa15.81■□□□□ 0.12
DDX39A-202ENST00000324340 USP42Q9H9J4 1324 aaKnown RBP15.8■□□□□ 0.12
DDX39A-202ENST00000324340 GPTP24298 496 aa15.8■□□□□ 0.12
DDX39A-202ENST00000324340 SSFA2P28290 1259 aa15.8■□□□□ 0.12
DDX39A-202ENST00000324340 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
DDX39A-202ENST00000324340 SKAP1Q86WV1 359 aa15.8■□□□□ 0.12
DDX39A-202ENST00000324340 JARID2Q92833 1246 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-202ENST00000324340 LAMB2P55268 1798 aa15.8■□□□□ 0.12
DDX39A-202ENST00000324340 EP400Q96L91 3159 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 ZPR1O75312 459 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 ANKRD45Q5TZF3 282 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 SUSD4Q5VX71 490 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 SMIM5Q71RC9 77 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 MYH3P11055 1940 aa15.78■□□□□ 0.12
DDX39A-202ENST00000324340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.77■□□□□ 0.12
DDX39A-202ENST00000324340 RAB11FIP3O75154 756 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 PDE4AP27815 886 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 RFC4P35249 363 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 RFX5P48382 616 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-202ENST00000324340 HSP90AB4PQ58FF6 505 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 CAMKK2Q96RR4 588 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
DDX39A-202ENST00000324340 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
DDX39A-202ENST00000324340 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
DDX39A-202ENST00000324340 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.12
DDX39A-202ENST00000324340 DDX60Q8IY21 1712 aaKnown RBP15.77■□□□□ 0.12
DDX39A-202ENST00000324340 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
DDX39A-202ENST00000324340 SURF6O75683 361 aaKnown RBP15.76■□□□□ 0.11
DDX39A-202ENST00000324340 NTSR2O95665 410 aa15.76■□□□□ 0.11
DDX39A-202ENST00000324340 CSF1RP07333 972 aa15.76■□□□□ 0.11
DDX39A-202ENST00000324340 UPF1Q92900 1129 aaKnown RBP eCLIP15.76■□□□□ 0.11
DDX39A-202ENST00000324340 LNPKQ9C0E8 428 aa15.76■□□□□ 0.11
DDX39A-202ENST00000324340 COPRSQ9NQ92 184 aa15.76■□□□□ 0.11
DDX39A-202ENST00000324340 SRP68Q9UHB9 627 aaKnown RBP15.76■□□□□ 0.11
DDX39A-202ENST00000324340 SH3TC1Q8TE82 1336 aa15.76■□□□□ 0.11
DDX39A-202ENST00000324340 RGS3P49796 1198 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 LMBR1LQ6UX01 489 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 QSER1Q2KHR3 1735 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
DDX39A-202ENST00000324340 PDE8AO60658 829 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 PHF14O94880 888 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 GSE1Q14687 1217 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 LRRCC1Q9C099 1032 aa15.75■□□□□ 0.11
DDX39A-202ENST00000324340 PTPN12Q05209 780 aaKnown RBP15.74■□□□□ 0.11
DDX39A-202ENST00000324340 FAM43AQ8N2R8 423 aa15.74■□□□□ 0.11
DDX39A-202ENST00000324340 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
DDX39A-202ENST00000324340 CTSWP56202 376 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
DDX39A-202ENST00000324340 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 TTLL11Q8NHH1 800 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 SETDB2Q96T68 719 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 BACH2Q9BYV9 841 aa15.73■□□□□ 0.11
DDX39A-202ENST00000324340 PA2G4Q9UQ80 394 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms