RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 CCDC93Q567U6 631 aa27.63■■■□□ 2.01
UBE2D3-201ENST00000321805 C7orf43Q8WVR3 580 aa27.63■■■□□ 2.01
UBE2D3-201ENST00000321805 HYPKQ9NX55 129 aa27.63■■■□□ 2.01
UBE2D3-201ENST00000321805 AIMP1Q12904 312 aaKnown RBP27.62■■■□□ 2.01
UBE2D3-201ENST00000321805 UTP14AQ9BVJ6 771 aaKnown RBP27.62■■■□□ 2.01
UBE2D3-201ENST00000321805 ZNF219Q9P2Y4 722 aaPredicted RBP27.62■■■□□ 2.01
UBE2D3-201ENST00000321805 TCIRG1Q13488 830 aa27.61■■■□□ 2.01
UBE2D3-201ENST00000321805 SENP3-EIF4A1A0A087X0R7 540 aa27.6■■■□□ 2.01
UBE2D3-201ENST00000321805 HOXA10P31260 410 aaPredicted RBP27.6■■■□□ 2.01
UBE2D3-201ENST00000321805 PLBD2Q8NHP8 589 aa27.6■■■□□ 2.01
UBE2D3-201ENST00000321805 NMRK2Q9NPI5 230 aa27.6■■■□□ 2.01
UBE2D3-201ENST00000321805 SLC10A5Q5PT55 438 aa27.59■■■□□ 2.01
UBE2D3-201ENST00000321805 RPGRQ92834 1020 aaKnown RBP27.59■■■□□ 2.01
UBE2D3-201ENST00000321805 TOMM70O94826 608 aa27.58■■■□□ 2.01
UBE2D3-201ENST00000321805 ANKRD13DQ6ZTN6 518 aa27.58■■■□□ 2.01
UBE2D3-201ENST00000321805 NLRP10Q86W26 655 aa27.58■■■□□ 2.01
UBE2D3-201ENST00000321805 WWC1Q8IX03 1113 aa27.58■■■□□ 2.01
UBE2D3-201ENST00000321805 RTKN2Q8IZC4 609 aa27.58■■■□□ 2.01
UBE2D3-201ENST00000321805 IL16Q14005 1332 aa27.58■■■□□ 2.01
UBE2D3-201ENST00000321805 GLTPD2A6NH11 291 aa27.57■■■□□ 2
UBE2D3-201ENST00000321805 NLRP3Q96P20 1036 aa27.57■■■□□ 2
UBE2D3-201ENST00000321805 CC2D2BQ6DHV5 1058 aa27.56■■■□□ 2
UBE2D3-201ENST00000321805 CRAMP1Q96RY5 1269 aa27.56■■■□□ 2
UBE2D3-201ENST00000321805 FKBP4Q02790 459 aaKnown RBP eCLIP27.55■■■□□ 22e-9■■□□□ 12.2
UBE2D3-201ENST00000321805 RBM17Q96I25 401 aaKnown RBP27.55■■■□□ 2
UBE2D3-201ENST00000321805 GRIPAP1Q4V328 841 aa27.54■■■□□ 2
UBE2D3-201ENST00000321805 C8orf58Q8NAV2 365 aa27.54■■■□□ 2
UBE2D3-201ENST00000321805 SH3TC1Q8TE82 1336 aa27.53■■■□□ 2
UBE2D3-201ENST00000321805 CCDC30Q5VVM6 783 aa27.53■■■□□ 2
UBE2D3-201ENST00000321805 SNED1Q8TER0 1413 aa27.52■■■□□ 2
UBE2D3-201ENST00000321805 DPY19L2Q6NUT2 758 aa27.52■■■□□ 2
UBE2D3-201ENST00000321805 C16orf71Q8IYS4 520 aaPredicted RBP27.52■■■□□ 2
UBE2D3-201ENST00000321805 RBM46Q8TBY0 533 aaKnown RBP27.52■■■□□ 2
UBE2D3-201ENST00000321805 ISCA1Q9BUE6 129 aa27.52■■■□□ 2
UBE2D3-201ENST00000321805 TRMT112Q9UI30 125 aaKnown RBP27.52■■■□□ 2
UBE2D3-201ENST00000321805 ELL2O00472 640 aaPredicted RBP27.51■■□□□ 1.99
UBE2D3-201ENST00000321805 GOLGA2Q08379 1002 aa27.51■■□□□ 1.99
UBE2D3-201ENST00000321805 WDR90Q96KV7 1748 aa27.5■■□□□ 1.99
UBE2D3-201ENST00000321805 HSPA6P17066 643 aa27.5■■□□□ 1.99
UBE2D3-201ENST00000321805 TRIM28Q13263 835 aaKnown RBP27.5■■□□□ 1.99
UBE2D3-201ENST00000321805 PSMD1Q99460 953 aa27.5■■□□□ 1.99
UBE2D3-201ENST00000321805 LAMB2P55268 1798 aa27.5■■□□□ 1.99
UBE2D3-201ENST00000321805 C3orf67Q6ZVT6 689 aa27.49■■□□□ 1.99
UBE2D3-201ENST00000321805 TSR2Q969E8 191 aaKnown RBP27.49■■□□□ 1.99
UBE2D3-201ENST00000321805 RRAGCQ9HB90 399 aa27.49■■□□□ 1.99
UBE2D3-201ENST00000321805 VEGFAP15692 232 aaPredicted RBP27.48■■□□□ 1.99
UBE2D3-201ENST00000321805 WDR63Q8IWG1 891 aa27.48■■□□□ 1.99
UBE2D3-201ENST00000321805 PPEF1O14829 653 aaPredicted RBP27.47■■□□□ 1.99
UBE2D3-201ENST00000321805 RIC3Q7Z5B4 369 aa27.47■■□□□ 1.99
UBE2D3-201ENST00000321805 DDX58O95786 925 aaKnown RBP27.46■■□□□ 1.99
UBE2D3-201ENST00000321805 OLFM4Q6UX06 510 aa27.46■■□□□ 1.99
UBE2D3-201ENST00000321805 TSPYL6Q8N831 410 aa27.46■■□□□ 1.99
UBE2D3-201ENST00000321805 PHAXQ9H814 394 aaKnown RBP27.46■■□□□ 1.99
UBE2D3-201ENST00000321805 DDX60Q8IY21 1712 aaKnown RBP27.45■■□□□ 1.99
UBE2D3-201ENST00000321805 FSTL1Q12841 308 aa27.45■■□□□ 1.98
UBE2D3-201ENST00000321805 ABCC4O15439 1325 aa27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 HCLS1P14317 486 aaPredicted RBP27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 IARSP41252 1262 aaKnown RBP27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 TWISTNBQ3B726 338 aaPredicted RBP27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 STK31Q9BXU1 1019 aa27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 TMX4Q9H1E5 349 aaPredicted RBP27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 ZNF277Q9NRM2 450 aaPredicted RBP27.44■■□□□ 1.98
UBE2D3-201ENST00000321805 ATP5J2-PTCD1G3V325 749 aa27.43■■□□□ 1.98
UBE2D3-201ENST00000321805 SYNE4Q8N205 404 aa27.43■■□□□ 1.98
UBE2D3-201ENST00000321805 CEP350Q5VT06 3117 aa27.42■■□□□ 1.98
UBE2D3-201ENST00000321805 BBOX1O75936 387 aa27.42■■□□□ 1.98
UBE2D3-201ENST00000321805 HSP90B1P14625 803 aaKnown RBP27.42■■□□□ 1.98
UBE2D3-201ENST00000321805 ATP6V0A2Q9Y487 856 aa27.42■■□□□ 1.98
UBE2D3-201ENST00000321805 FANCIQ9NVI1 1328 aa27.41■■□□□ 1.98
UBE2D3-201ENST00000321805 DDX46Q7L014 1031 aaKnown RBP27.41■■□□□ 1.98
UBE2D3-201ENST00000321805 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
UBE2D3-201ENST00000321805 CACNA1FO60840 1977 aa27.4■■□□□ 1.98
UBE2D3-201ENST00000321805 TMC4Q7Z404 712 aa27.4■■□□□ 1.98
UBE2D3-201ENST00000321805 CCDC191Q8NCU4 936 aa27.4■■□□□ 1.98
UBE2D3-201ENST00000321805 SMC1BQ8NDV3 1235 aa27.4■■□□□ 1.98
UBE2D3-201ENST00000321805 APLP1P51693 650 aa27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 GRAPQ13588 217 aa27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 SF3B3Q15393 1217 aaKnown RBP27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 GRAPLQ8TC17 118 aaPredicted RBP27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 FAM89AQ96GI7 184 aa27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 METTL22Q9BUU2 404 aaPredicted RBP27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 VPS33BQ9H267 617 aa27.39■■□□□ 1.98
UBE2D3-201ENST00000321805 POTECB2RU33 542 aa27.38■■□□□ 1.97
UBE2D3-201ENST00000321805 FZD9O00144 591 aa27.38■■□□□ 1.97
UBE2D3-201ENST00000321805 ZBTB38Q8NAP3 1195 aaPredicted RBP27.38■■□□□ 1.97
UBE2D3-201ENST00000321805 JDP2Q8WYK2 163 aa27.38■■□□□ 1.97
UBE2D3-201ENST00000321805 L3MBTL3Q96JM7 780 aaPredicted RBP27.38■■□□□ 1.97
UBE2D3-201ENST00000321805 MYD88Q99836 296 aa27.38■■□□□ 1.97
UBE2D3-201ENST00000321805 SCN4AP35499 1836 aa27.37■■□□□ 1.97
UBE2D3-201ENST00000321805 DDNO94850 711 aaPredicted RBP27.37■■□□□ 1.97
UBE2D3-201ENST00000321805 KSR2Q6VAB6 950 aa27.37■■□□□ 1.97
UBE2D3-201ENST00000321805 SP8Q8IXZ3 490 aa27.37■■□□□ 1.97
UBE2D3-201ENST00000321805 IQCA1LA6NCM1 817 aa27.36■■□□□ 1.97
UBE2D3-201ENST00000321805 IRS4O14654 1257 aaPredicted RBP27.36■■□□□ 1.97
UBE2D3-201ENST00000321805 SUPT20HQ8NEM7 779 aa27.36■■□□□ 1.97
UBE2D3-201ENST00000321805 SALL2Q9Y467 1007 aaPredicted RBP27.36■■□□□ 1.97
UBE2D3-201ENST00000321805 LRRC37AA6NMS7 1700 aa27.36■■□□□ 1.97
UBE2D3-201ENST00000321805 RTFDC1Q9BY42 306 aaPredicted RBP27.35■■□□□ 1.97
UBE2D3-201ENST00000321805 MYH16Q9H6N6 1097 aa27.35■■□□□ 1.97
UBE2D3-201ENST00000321805 CWC25Q9NXE8 425 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms