RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
EDC3-201ENST00000315127 CCT2P78371 535 aaKnown RBP16.84■□□□□ 0.29
EDC3-201ENST00000315127 L1TD1Q5T7N2 865 aaKnown RBP16.84■□□□□ 0.29
EDC3-201ENST00000315127 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
EDC3-201ENST00000315127 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
EDC3-201ENST00000315127 TRDNQ13061 729 aa16.83■□□□□ 0.29
EDC3-201ENST00000315127 PUS3Q9BZE2 481 aaKnown RBP16.83■□□□□ 0.29
EDC3-201ENST00000315127 MED14O60244 1454 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 SNAP23O00161 211 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 CRB1P82279 1406 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 PKP1Q13835 747 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 SSH3Q8TE77 659 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 WDR17Q8IZU2 1322 aa16.83■□□□□ 0.28
EDC3-201ENST00000315127 TAF5LO75529 589 aa16.82■□□□□ 0.28
EDC3-201ENST00000315127 DNTTIP2Q5QJE6 756 aaKnown RBP16.82■□□□□ 0.28
EDC3-201ENST00000315127 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
EDC3-201ENST00000315127 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
EDC3-201ENST00000315127 PIGBQ92521 554 aa16.82■□□□□ 0.28
EDC3-201ENST00000315127 RBM8AQ9Y5S9 174 aaKnown RBP16.82■□□□□ 0.28
EDC3-201ENST00000315127 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
EDC3-201ENST00000315127 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
EDC3-201ENST00000315127 EVI5LQ96CN4 794 aa16.82■□□□□ 0.28
EDC3-201ENST00000315127 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
EDC3-201ENST00000315127 PLBD2Q8NHP8 589 aa16.81■□□□□ 0.28
EDC3-201ENST00000315127 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
EDC3-201ENST00000315127 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
EDC3-201ENST00000315127 CHGBP05060 677 aa16.81■□□□□ 0.28
EDC3-201ENST00000315127 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
EDC3-201ENST00000315127 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
EDC3-201ENST00000315127 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
EDC3-201ENST00000315127 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
EDC3-201ENST00000315127 RAI14Q9P0K7 980 aa16.8■□□□□ 0.28
EDC3-201ENST00000315127 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
EDC3-201ENST00000315127 HOXB7P09629 217 aa16.8■□□□□ 0.28
EDC3-201ENST00000315127 A0A1B0GUL7 405 aa16.79■□□□□ 0.28
EDC3-201ENST00000315127 ZPR1O75312 459 aa16.79■□□□□ 0.28
EDC3-201ENST00000315127 PSMA5P28066 241 aa16.79■□□□□ 0.28
EDC3-201ENST00000315127 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
EDC3-201ENST00000315127 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
EDC3-201ENST00000315127 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
EDC3-201ENST00000315127 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
EDC3-201ENST00000315127 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
EDC3-201ENST00000315127 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
EDC3-201ENST00000315127 DRC7Q8IY82 874 aa16.78■□□□□ 0.28
EDC3-201ENST00000315127 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
EDC3-201ENST00000315127 PTH1RQ03431 593 aa16.77■□□□□ 0.28
EDC3-201ENST00000315127 PI16Q6UXB8 463 aa16.77■□□□□ 0.28
EDC3-201ENST00000315127 KDRP35968 1356 aa16.77■□□□□ 0.28
EDC3-201ENST00000315127 KCNQ2O43526 872 aa16.77■□□□□ 0.28
EDC3-201ENST00000315127 ATP2B3Q16720 1220 aa16.77■□□□□ 0.28
EDC3-201ENST00000315127 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
EDC3-201ENST00000315127 TNNI3KQ59H18 835 aa16.77■□□□□ 0.27
EDC3-201ENST00000315127 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.27
EDC3-201ENST00000315127 FPGT-TNNI3KV9GXZ4 949 aa16.77■□□□□ 0.27
EDC3-201ENST00000315127 HIP1O00291 1037 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 ITGA6P23229 1130 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 RBM25P49756 843 aaKnown RBP16.76■□□□□ 0.27
EDC3-201ENST00000315127 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 AK2P54819 239 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 NBPF14Q5TI25 921 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
EDC3-201ENST00000315127 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 BRF1Q92994 677 aa16.76■□□□□ 0.27
EDC3-201ENST00000315127 SASH1O94885 1247 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 HLFQ16534 295 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
EDC3-201ENST00000315127 AIDAQ96BJ3 306 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 NEURL4Q96JN8 1562 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 IBTKQ9P2D0 1353 aaPredicted RBP16.75■□□□□ 0.27
EDC3-201ENST00000315127 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
EDC3-201ENST00000315127 RASEFQ8IZ41 740 aa16.75■□□□□ 0.27
EDC3-201ENST00000315127 A0A0D9SFI3 127 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 GNPATO15228 680 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 ARID3AQ99856 593 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 TDO2P48775 406 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 MIGA1Q8NAN2 632 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 SYCE3A1L190 88 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 RXRAP19793 462 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
EDC3-201ENST00000315127 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
EDC3-201ENST00000315127 DBNLQ9UJU6 430 aaKnown RBP16.74■□□□□ 0.27
EDC3-201ENST00000315127 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
EDC3-201ENST00000315127 PAG1Q9NWQ8 432 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 SLC9C2Q5TAH2 1124 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 ADCY9O60503 1353 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
EDC3-201ENST00000315127 MCM2P49736 904 aa16.73■□□□□ 0.27
EDC3-201ENST00000315127 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms