RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 LAMB2P55268 1798 aa11.01□□□□□ -0.65
MSL3-201ENST00000312196 THSD7BQ9C0I4 1608 aa11.01□□□□□ -0.65
MSL3-201ENST00000312196 NTSR2O95665 410 aa11.01□□□□□ -0.65
MSL3-201ENST00000312196 HSPA1AP0DMV8 641 aaKnown RBP11.01□□□□□ -0.65
MSL3-201ENST00000312196 HSPA1BP0DMV9 641 aaKnown RBP11.01□□□□□ -0.65
MSL3-201ENST00000312196 TRIM28Q13263 835 aaKnown RBP11.01□□□□□ -0.65
MSL3-201ENST00000312196 TMC4Q7Z404 712 aa11.01□□□□□ -0.65
MSL3-201ENST00000312196 TNS4Q8IZW8 715 aa11□□□□□ -0.65
MSL3-201ENST00000312196 MIS18AQ9NYP9 233 aa11□□□□□ -0.65
MSL3-201ENST00000312196 HACL1Q9UJ83 578 aa11□□□□□ -0.65
MSL3-201ENST00000312196 IL16Q14005 1332 aa11□□□□□ -0.65
MSL3-201ENST00000312196 GPC2Q8N158 579 aa11□□□□□ -0.65
MSL3-201ENST00000312196 NGEFQ8N5V2 710 aa11□□□□□ -0.65
MSL3-201ENST00000312196 RBM17Q96I25 401 aaKnown RBP11□□□□□ -0.65
MSL3-201ENST00000312196 ADAMTS8Q9UP79 889 aa11□□□□□ -0.65
MSL3-201ENST00000312196 GNAI1P63096 354 aa10.99□□□□□ -0.65
MSL3-201ENST00000312196 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
MSL3-201ENST00000312196 HYPKQ9NX55 129 aa10.99□□□□□ -0.65
MSL3-201ENST00000312196 LRRC37AA6NMS7 1700 aa10.99□□□□□ -0.65
MSL3-201ENST00000312196 CDHR2Q9BYE9 1310 aa10.99□□□□□ -0.65
MSL3-201ENST00000312196 RASSF10A6NK89 507 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 ITGBL1O95965 494 aaPredicted RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 TCIRG1Q13488 830 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 UTP14AQ9BVJ6 771 aaKnown RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 TMEM88BA6NKF7 163 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 CTCFP49711 727 aaPredicted RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 SUSD4Q5VX71 490 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 PLBD2Q8NHP8 589 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 DBF4Q9UBU7 674 aaPredicted RBP10.98□□□□□ -0.65
MSL3-201ENST00000312196 ABCC12Q96J65 1359 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 CACNA1SQ13698 1873 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
MSL3-201ENST00000312196 NPHP1O15259 732 aa10.97□□□□□ -0.65
MSL3-201ENST00000312196 HSP90B1P14625 803 aaKnown RBP10.97□□□□□ -0.65
MSL3-201ENST00000312196 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
MSL3-201ENST00000312196 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
MSL3-201ENST00000312196 SYNE4Q8N205 404 aa10.97□□□□□ -0.65
MSL3-201ENST00000312196 HHIPL1Q96JK4 782 aa10.97□□□□□ -0.65
MSL3-201ENST00000312196 ISCA1Q9BUE6 129 aa10.97□□□□□ -0.65
MSL3-201ENST00000312196 RRP7AQ9Y3A4 280 aaKnown RBP10.97□□□□□ -0.65
MSL3-201ENST00000312196 BBOX1O75936 387 aa10.96□□□□□ -0.65
MSL3-201ENST00000312196 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.65
MSL3-201ENST00000312196 USP50Q70EL3 339 aaPredicted RBP10.96□□□□□ -0.65
MSL3-201ENST00000312196 NLRP10Q86W26 655 aa10.96□□□□□ -0.66
MSL3-201ENST00000312196 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
MSL3-201ENST00000312196 EPHX2P34913 555 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 PIP4K2AP48426 406 aaPredicted RBP10.95□□□□□ -0.66
MSL3-201ENST00000312196 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
MSL3-201ENST00000312196 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
MSL3-201ENST00000312196 NLRP3Q96P20 1036 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 GTF2E1P29083 439 aaPredicted RBP10.95□□□□□ -0.66
MSL3-201ENST00000312196 SP8Q8IXZ3 490 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 JDP2Q8WYK2 163 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 AIDAQ96BJ3 306 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 WBP1LQ9NX94 342 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 ATP6V0A2Q9Y487 856 aa10.95□□□□□ -0.66
MSL3-201ENST00000312196 MYL6BP14649 208 aa10.94□□□□□ -0.66
MSL3-201ENST00000312196 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
MSL3-201ENST00000312196 SF3B3Q15393 1217 aaKnown RBP10.94□□□□□ -0.66
MSL3-201ENST00000312196 COPS6Q7L5N1 327 aa10.94□□□□□ -0.66
MSL3-201ENST00000312196 XAGE3Q8WTP9 111 aa10.94□□□□□ -0.66
MSL3-201ENST00000312196 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
MSL3-201ENST00000312196 ECE1P42892 770 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 HTRA3P83110 453 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 DUSP27Q5VZP5 1158 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 MBIPQ9NS73 344 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 SH3TC1Q8TE82 1336 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
MSL3-201ENST00000312196 PROSER3Q2NL68 480 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 HDGFL1Q5TGJ6 251 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 CCDC146Q8IYE0 955 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
MSL3-201ENST00000312196 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 ZNF609O15014 1411 aa10.93□□□□□ -0.66
MSL3-201ENST00000312196 CA12O43570 354 aa10.92□□□□□ -0.66
MSL3-201ENST00000312196 ANKRD13DQ6ZTN6 518 aa10.92□□□□□ -0.66
MSL3-201ENST00000312196 EIF2S2P20042 333 aaKnown RBP10.92□□□□□ -0.66
MSL3-201ENST00000312196 LMOD1P29536 600 aaPredicted RBP10.92□□□□□ -0.66
MSL3-201ENST00000312196 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
MSL3-201ENST00000312196 APAF1O14727 1248 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 MAP2K2P36507 400 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 GRAPQ13588 217 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 DEFB115Q30KQ5 88 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 WDR63Q8IWG1 891 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 CNTROBQ8N137 903 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
MSL3-201ENST00000312196 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
MSL3-201ENST00000312196 CCDC30Q5VVM6 783 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 ZNF277Q9NRM2 450 aaPredicted RBP10.91□□□□□ -0.66
MSL3-201ENST00000312196 CHPF2Q9P2E5 772 aa10.91□□□□□ -0.66
MSL3-201ENST00000312196 RTL9Q8NET4 1388 aa10.9□□□□□ -0.66
MSL3-201ENST00000312196 ABCC4O15439 1325 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms