RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PARP10Q53GL7 1025 aa11.59□□□□□ -0.55
PDE4D-201ENST00000309641 FRAT1Q92837 279 aaPredicted RBP11.59□□□□□ -0.55
PDE4D-201ENST00000309641 FAM89AQ96GI7 184 aa11.59□□□□□ -0.55
PDE4D-201ENST00000309641 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
PDE4D-201ENST00000309641 NEURL1BA8MQ27 555 aa11.58□□□□□ -0.56
PDE4D-201ENST00000309641 TRIM28Q13263 835 aaKnown RBP11.58□□□□□ -0.56
PDE4D-201ENST00000309641 BEND3Q5T5X7 828 aa11.58□□□□□ -0.56
PDE4D-201ENST00000309641 TPTE2Q6XPS3 522 aa11.58□□□□□ -0.56
PDE4D-201ENST00000309641 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
PDE4D-201ENST00000309641 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
PDE4D-201ENST00000309641 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
PDE4D-201ENST00000309641 CD2APQ9Y5K6 639 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 PTPRCP08575 1304 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 N4BP2Q86UW6 1770 aaPredicted RBP11.57□□□□□ -0.56
PDE4D-201ENST00000309641 HCLS1P14317 486 aaPredicted RBP11.57□□□□□ -0.56
PDE4D-201ENST00000309641 TRIM27P14373 513 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 DPEP1P16444 411 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 KCNA3P22001 575 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
PDE4D-201ENST00000309641 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
PDE4D-201ENST00000309641 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
PDE4D-201ENST00000309641 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
PDE4D-201ENST00000309641 LINS1Q8NG48 757 aa11.56□□□□□ -0.56
PDE4D-201ENST00000309641 CLUAP1Q96AJ1 413 aa11.56□□□□□ -0.56
PDE4D-201ENST00000309641 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
PDE4D-201ENST00000309641 CWC25Q9NXE8 425 aaPredicted RBP11.56□□□□□ -0.56
PDE4D-201ENST00000309641 KIF16BQ96L93 1317 aa11.55□□□□□ -0.56
PDE4D-201ENST00000309641 PLIN1O60240 522 aa11.55□□□□□ -0.56
PDE4D-201ENST00000309641 ST5P78524 1137 aa11.55□□□□□ -0.56
PDE4D-201ENST00000309641 GCKRQ14397 625 aa11.55□□□□□ -0.56
PDE4D-201ENST00000309641 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
PDE4D-201ENST00000309641 IBTKQ9P2D0 1353 aaPredicted RBP11.55□□□□□ -0.56
PDE4D-201ENST00000309641 SH3TC1Q8TE82 1336 aa11.55□□□□□ -0.56
PDE4D-201ENST00000309641 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
PDE4D-201ENST00000309641 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
PDE4D-201ENST00000309641 ATF7IPQ6VMQ6 1270 aa11.54□□□□□ -0.56
PDE4D-201ENST00000309641 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
PDE4D-201ENST00000309641 C2CD5Q86YS7 1000 aa11.54□□□□□ -0.56
PDE4D-201ENST00000309641 IRS4O14654 1257 aaPredicted RBP11.53□□□□□ -0.56
PDE4D-201ENST00000309641 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
PDE4D-201ENST00000309641 RLBP1P12271 317 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 CASP7P55210 303 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 TGFB2P61812 414 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 SLC10A5Q5PT55 438 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 SLC51AQ86UW1 340 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 SRCIN1Q9C0H9 1055 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 DDX60Q8IY21 1712 aaKnown RBP11.53□□□□□ -0.56
PDE4D-201ENST00000309641 KLRG2A4D1S0 409 aaPredicted RBP11.53□□□□□ -0.56
PDE4D-201ENST00000309641 H7C1W4 665 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 SRGNP10124 158 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 ARHGAP45Q92619 1136 aa11.53□□□□□ -0.56
PDE4D-201ENST00000309641 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
PDE4D-201ENST00000309641 ABCC4O15439 1325 aa11.52□□□□□ -0.56
PDE4D-201ENST00000309641 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.56
PDE4D-201ENST00000309641 PDE6BP35913 854 aa11.52□□□□□ -0.56
PDE4D-201ENST00000309641 ZKSCAN2Q63HK3 967 aa11.52□□□□□ -0.56
PDE4D-201ENST00000309641 H0YIN7 160 aa11.52□□□□□ -0.57
PDE4D-201ENST00000309641 GRM8O00222 908 aa11.52□□□□□ -0.57
PDE4D-201ENST00000309641 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.57
PDE4D-201ENST00000309641 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDE4D-201ENST00000309641 CRY2Q49AN0 593 aa11.52□□□□□ -0.57
PDE4D-201ENST00000309641 PANK1Q8TE04 598 aa11.52□□□□□ -0.57
PDE4D-201ENST00000309641 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDE4D-201ENST00000309641 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
PDE4D-201ENST00000309641 USP44Q9H0E7 712 aa11.52□□□□□ -0.57
PDE4D-201ENST00000309641 COL4A1P02462 1669 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 LAMB2P55268 1798 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 ALDH1L1O75891 902 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 EPHA10Q5JZY3 1008 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 C20orf194Q5TEA3 1177 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
PDE4D-201ENST00000309641 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 NLRP3Q96P20 1036 aa11.51□□□□□ -0.57
PDE4D-201ENST00000309641 BRCA1P38398 1863 aaKnown RBP11.51□□□□□ -0.57
PDE4D-201ENST00000309641 TAF1P21675 1872 aa11.5□□□□□ -0.57
PDE4D-201ENST00000309641 RIC1Q4ADV7 1423 aa11.5□□□□□ -0.57
PDE4D-201ENST00000309641 INTS3Q68E01 1043 aaKnown RBP11.5□□□□□ -0.57
PDE4D-201ENST00000309641 C9orf78Q9NZ63 289 aaPredicted RBP11.5□□□□□ -0.57
PDE4D-201ENST00000309641 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
PDE4D-201ENST00000309641 MEIS3Q99687 375 aa11.5□□□□□ -0.57
PDE4D-201ENST00000309641 BCS1LQ9Y276 419 aa11.5□□□□□ -0.57
PDE4D-201ENST00000309641 CDHR2Q9BYE9 1310 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 DLEC1Q9Y238 1755 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
PDE4D-201ENST00000309641 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 DZIP1LQ8IYY4 767 aaKnown RBP11.49□□□□□ -0.57
PDE4D-201ENST00000309641 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 SEC31BQ9NQW1 1179 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 PIM2Q9P1W9 311 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
PDE4D-201ENST00000309641 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
PDE4D-201ENST00000309641 PDE8AO60658 829 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms