RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
RUNX3-201ENST00000308873 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
RUNX3-201ENST00000308873 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
RUNX3-201ENST00000308873 A0A0D9SFI3 127 aa17.55■□□□□ 0.4
RUNX3-201ENST00000308873 PDCP20941 246 aa17.55■□□□□ 0.4
RUNX3-201ENST00000308873 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
RUNX3-201ENST00000308873 CCT2P78371 535 aaKnown RBP17.54■□□□□ 0.4
RUNX3-201ENST00000308873 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 SYTL4Q96C24 671 aaPredicted RBP17.54■□□□□ 0.4
RUNX3-201ENST00000308873 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 EVI5LQ96CN4 794 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 NEUROD6Q96NK8 337 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
RUNX3-201ENST00000308873 NR1I2O75469 434 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 PSME1Q06323 249 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 KIAA1524Q8TCG1 905 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
RUNX3-201ENST00000308873 SLC27A2O14975 620 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 NEO1Q92859 1461 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
RUNX3-201ENST00000308873 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
RUNX3-201ENST00000308873 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
RUNX3-201ENST00000308873 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 CHST3Q7LGC8 479 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 BRF1Q92994 677 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 USP6P35125 1406 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 TCHHQ07283 1943 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
RUNX3-201ENST00000308873 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
RUNX3-201ENST00000308873 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
RUNX3-201ENST00000308873 ESCO1Q5FWF5 840 aa17.51■□□□□ 0.39
RUNX3-201ENST00000308873 DBF4Q9UBU7 674 aaPredicted RBP17.51■□□□□ 0.39
RUNX3-201ENST00000308873 MRVI1Q9Y6F6 885 aa17.51■□□□□ 0.39
RUNX3-201ENST00000308873 ARHGEF10O15013 1369 aa17.51■□□□□ 0.39
RUNX3-201ENST00000308873 DDX46Q7L014 1031 aaKnown RBP17.51■□□□□ 0.39
RUNX3-201ENST00000308873 SEC62Q99442 399 aaKnown RBP17.51■□□□□ 0.39
RUNX3-201ENST00000308873 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
RUNX3-201ENST00000308873 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
RUNX3-201ENST00000308873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
RUNX3-201ENST00000308873 ZNF589Q86UQ0 364 aaPredicted RBP17.5■□□□□ 0.39
RUNX3-201ENST00000308873 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
RUNX3-201ENST00000308873 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
RUNX3-201ENST00000308873 CDC42BPGQ6DT37 1551 aa17.5■□□□□ 0.39
RUNX3-201ENST00000308873 ME1P48163 572 aa17.5■□□□□ 0.39
RUNX3-201ENST00000308873 POLA2Q14181 598 aa17.5■□□□□ 0.39
RUNX3-201ENST00000308873 SF3A1Q15459 793 aaKnown RBP17.5■□□□□ 0.39
RUNX3-201ENST00000308873 SMAP1Q8IYB5 467 aaPredicted RBP17.5■□□□□ 0.39
RUNX3-201ENST00000308873 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
RUNX3-201ENST00000308873 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
RUNX3-201ENST00000308873 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 ERC1Q8IUD2 1116 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 LEO1Q8WVC0 666 aaPredicted RBP17.49■□□□□ 0.39
RUNX3-201ENST00000308873 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 AOX1Q06278 1338 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
RUNX3-201ENST00000308873 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
RUNX3-201ENST00000308873 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
RUNX3-201ENST00000308873 TPM3P06753 285 aa17.48■□□□□ 0.39
RUNX3-201ENST00000308873 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
RUNX3-201ENST00000308873 Q6ZUG5 572 aa17.48■□□□□ 0.39
RUNX3-201ENST00000308873 MYD88Q99836 296 aa17.48■□□□□ 0.39
RUNX3-201ENST00000308873 CCDC73Q6ZRK6 1079 aa17.48■□□□□ 0.39
RUNX3-201ENST00000308873 BIN1O00499 593 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
RUNX3-201ENST00000308873 GRM8O00222 908 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
RUNX3-201ENST00000308873 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 TNRQ92752 1358 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 KINO60870 393 aaKnown RBP17.47■□□□□ 0.39
RUNX3-201ENST00000308873 ANKRD1Q15327 319 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
RUNX3-201ENST00000308873 ZBTB9Q96C00 473 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 NCOA5Q9HCD5 579 aaKnown RBP17.47■□□□□ 0.39
RUNX3-201ENST00000308873 PRDM4Q9UKN5 801 aa17.47■□□□□ 0.39
RUNX3-201ENST00000308873 STK11IPQ8N1F8 1099 aa17.46■□□□□ 0.39
RUNX3-201ENST00000308873 NEK1Q96PY6 1258 aa17.46■□□□□ 0.39
RUNX3-201ENST00000308873 SASH1O94885 1247 aa17.46■□□□□ 0.38
RUNX3-201ENST00000308873 SMC2O95347 1197 aa17.46■□□□□ 0.38
RUNX3-201ENST00000308873 KSR2Q6VAB6 950 aa17.46■□□□□ 0.38
RUNX3-201ENST00000308873 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.38
RUNX3-201ENST00000308873 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
RUNX3-201ENST00000308873 KCNA6P17658 529 aa17.45■□□□□ 0.38
RUNX3-201ENST00000308873 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
RUNX3-201ENST00000308873 ZNF75DP51815 510 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms