RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 KCNB2Q92953 911 aa17.12■□□□□ 0.33
LRRFIP1-203ENST00000308482 CLIP2Q9UDT6 1046 aa17.12■□□□□ 0.33
LRRFIP1-203ENST00000308482 ELP1O95163 1332 aa17.12■□□□□ 0.33
LRRFIP1-203ENST00000308482 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
LRRFIP1-203ENST00000308482 TECPR2O15040 1411 aa17.12■□□□□ 0.33
LRRFIP1-203ENST00000308482 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 CCDC112Q8NEF3 446 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 V9GYY5 206 aaPredicted RBP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 BICD2Q8TD16 824 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 FMN2Q9NZ56 1722 aa17.11■□□□□ 0.33
LRRFIP1-203ENST00000308482 SLC27A2O14975 620 aa17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 DDX11Q96FC9 970 aa17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 CRYBG1Q9Y4K1 1723 aa17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 A0A087WWV3 80 aa17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
LRRFIP1-203ENST00000308482 CACNA1FO60840 1977 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 KCNQ3O43525 872 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 IFIT2P09913 472 aaKnown RBP17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 SCAND2PQ9GZW5 306 aaPredicted RBP17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 JAK2O60674 1132 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 AACSQ86V21 672 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 DDX19AQ9NUU7 478 aaKnown RBP17.09■□□□□ 0.33
LRRFIP1-203ENST00000308482 A0A0D9SFI3 127 aa17.08■□□□□ 0.33
LRRFIP1-203ENST00000308482 TOB2Q14106 344 aaPredicted RBP17.08■□□□□ 0.33
LRRFIP1-203ENST00000308482 RBM43Q6ZSC3 357 aaKnown RBP17.08■□□□□ 0.33
LRRFIP1-203ENST00000308482 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.33
LRRFIP1-203ENST00000308482 CEBPZQ03701 1054 aaKnown RBP17.08■□□□□ 0.32
LRRFIP1-203ENST00000308482 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
LRRFIP1-203ENST00000308482 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
LRRFIP1-203ENST00000308482 PDCP20941 246 aa17.07■□□□□ 0.32
LRRFIP1-203ENST00000308482 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
LRRFIP1-203ENST00000308482 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
LRRFIP1-203ENST00000308482 EVI5LQ96CN4 794 aa17.07■□□□□ 0.32
LRRFIP1-203ENST00000308482 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
LRRFIP1-203ENST00000308482 PAXBP1Q9Y5B6 917 aa17.07■□□□□ 0.32
LRRFIP1-203ENST00000308482 SYCP1Q15431 976 aa17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 CGNQ9P2M7 1197 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 LRRC8AQ8IWT6 810 aa17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 KIF18AQ8NI77 898 aa17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 LGR6Q9HBX8 967 aa17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 TRMT1Q9NXH9 659 aaKnown RBP17.06■□□□□ 0.32
LRRFIP1-203ENST00000308482 ADCY9O60503 1353 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 RPS6KB1P23443 525 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 NLRP6P59044 892 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 KMT5BQ4FZB7 885 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 BOLA2Q9H3K6 86 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 TOPAZ1Q8N9V7 1692 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 SLFN14P0C7P3 912 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 PSMA5P28066 241 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 HOXC9P31274 260 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 FOSBP53539 338 aa17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 EIF4A1P60842 406 aaKnown RBP17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 EAF2Q96CJ1 260 aaPredicted RBP17.05■□□□□ 0.32
LRRFIP1-203ENST00000308482 IQCB1Q15051 598 aa17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 FTOQ9C0B1 505 aaKnown RBP eCLIP17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 BRF1Q92994 677 aa17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 EDC3Q96F86 508 aaKnown RBP17.04■□□□□ 0.32
LRRFIP1-203ENST00000308482 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 ERCC4Q92889 916 aaPredicted RBP17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 MORC2Q9Y6X9 1032 aaPredicted RBP17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 NPHP1O15259 732 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 SASH1O94885 1247 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 SKILP12757 684 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 SLC26A8Q96RN1 970 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
LRRFIP1-203ENST00000308482 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.32
LRRFIP1-203ENST00000308482 SIL1Q9H173 461 aa17.02■□□□□ 0.32
LRRFIP1-203ENST00000308482 CHGBP05060 677 aa17.02■□□□□ 0.31
LRRFIP1-203ENST00000308482 RESTQ13127 1097 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms