RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 IFFO2Q5TF58 517 aa26.87■■□□□ 1.89
RER1-201ENST00000306256 SNED1Q8TER0 1413 aa26.87■■□□□ 1.89
RER1-201ENST00000306256 C3orf67Q6ZVT6 689 aa26.86■■□□□ 1.89
RER1-201ENST00000306256 SLC51AQ86UW1 340 aa26.86■■□□□ 1.89
RER1-201ENST00000306256 SYNE4Q8N205 404 aa26.86■■□□□ 1.89
RER1-201ENST00000306256 RUNDC1Q96C34 613 aa26.86■■□□□ 1.89
RER1-201ENST00000306256 LAS1LQ9Y4W2 734 aaKnown RBP26.86■■□□□ 1.89
RER1-201ENST00000306256 TRIM35Q9UPQ4 493 aa26.85■■□□□ 1.89
RER1-201ENST00000306256 HOXA10P31260 410 aaPredicted RBP26.84■■□□□ 1.89
RER1-201ENST00000306256 IARSP41252 1262 aaKnown RBP26.84■■□□□ 1.89
RER1-201ENST00000306256 CHL1O00533 1208 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 AIMP1Q12904 312 aaKnown RBP26.83■■□□□ 1.89
RER1-201ENST00000306256 PARP10Q53GL7 1025 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 CHADLQ6NUI6 762 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 PPP1R42Q7Z4L9 355 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 JMYQ8N9B5 988 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 XAGE3Q8WTP9 111 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 L3MBTL3Q96JM7 780 aaPredicted RBP26.83■■□□□ 1.89
RER1-201ENST00000306256 ADAMTS8Q9UP79 889 aa26.83■■□□□ 1.89
RER1-201ENST00000306256 COPS6Q7L5N1 327 aa26.82■■□□□ 1.88
RER1-201ENST00000306256 COL4A5P29400 1685 aa26.82■■□□□ 1.88
RER1-201ENST00000306256 TCERG1O14776 1098 aaKnown RBP26.81■■□□□ 1.88
RER1-201ENST00000306256 RBM17Q96I25 401 aaKnown RBP26.81■■□□□ 1.88
RER1-201ENST00000306256 UTP14AQ9BVJ6 771 aaKnown RBP26.81■■□□□ 1.88
RER1-201ENST00000306256 IQCA1LA6NCM1 817 aa26.8■■□□□ 1.88
RER1-201ENST00000306256 PSMD1Q99460 953 aa26.8■■□□□ 1.88
RER1-201ENST00000306256 TAF1DQ9H5J8 278 aaPredicted RBP26.8■■□□□ 1.88
RER1-201ENST00000306256 TAF1P21675 1872 aa26.79■■□□□ 1.88
RER1-201ENST00000306256 CC2D2BQ6DHV5 1058 aa26.79■■□□□ 1.88
RER1-201ENST00000306256 CRAMP1Q96RY5 1269 aa26.79■■□□□ 1.88
RER1-201ENST00000306256 PRKRIP1Q9H875 184 aaPredicted RBP26.79■■□□□ 1.88
RER1-201ENST00000306256 FZD9O00144 591 aa26.78■■□□□ 1.88
RER1-201ENST00000306256 PPEF1O14829 653 aaPredicted RBP26.78■■□□□ 1.88
RER1-201ENST00000306256 DDX21Q9NR30 783 aaKnown RBP eCLIP26.78■■□□□ 1.88
RER1-201ENST00000306256 CHPF2Q9P2E5 772 aa26.78■■□□□ 1.88
RER1-201ENST00000306256 NLRP3Q96P20 1036 aa26.77■■□□□ 1.88
RER1-201ENST00000306256 RNF123Q5XPI4 1314 aa26.76■■□□□ 1.87
RER1-201ENST00000306256 NLRP10Q86W26 655 aa26.76■■□□□ 1.87
RER1-201ENST00000306256 JDP2Q8WYK2 163 aa26.76■■□□□ 1.87
RER1-201ENST00000306256 ZNF428Q96B54 188 aa26.76■■□□□ 1.87
RER1-201ENST00000306256 ADAMTSL1Q8N6G6 1762 aa26.76■■□□□ 1.87
RER1-201ENST00000306256 EAPPQ56P03 285 aaPredicted RBP26.75■■□□□ 1.87
RER1-201ENST00000306256 HSP90AB3PQ58FF7 597 aa26.75■■□□□ 1.87
RER1-201ENST00000306256 SLC10A5Q5PT55 438 aa26.75■■□□□ 1.87
RER1-201ENST00000306256 HDGFL1Q5TGJ6 251 aa26.75■■□□□ 1.87
RER1-201ENST00000306256 LDHDQ86WU2 507 aa26.75■■□□□ 1.87
RER1-201ENST00000306256 HACL1Q9UJ83 578 aa26.75■■□□□ 1.87
RER1-201ENST00000306256 HCLS1P14317 486 aaPredicted RBP26.74■■□□□ 1.87
RER1-201ENST00000306256 TCIRG1Q13488 830 aa26.74■■□□□ 1.87
RER1-201ENST00000306256 DDX60Q8IY21 1712 aaKnown RBP26.73■■□□□ 1.87
RER1-201ENST00000306256 ABCC4O15439 1325 aa26.73■■□□□ 1.87
RER1-201ENST00000306256 EPHX2P34913 555 aa26.73■■□□□ 1.87
RER1-201ENST00000306256 LTBP1Q14766 1721 aa26.73■■□□□ 1.87
RER1-201ENST00000306256 GPC2Q8N158 579 aa26.72■■□□□ 1.87
RER1-201ENST00000306256 LARGE2Q8N3Y3 721 aa26.72■■□□□ 1.87
RER1-201ENST00000306256 GRIPAP1Q4V328 841 aa26.71■■□□□ 1.87
RER1-201ENST00000306256 CFAP44Q96MT7 982 aa26.71■■□□□ 1.87
RER1-201ENST00000306256 MBIPQ9NS73 344 aa26.71■■□□□ 1.87
RER1-201ENST00000306256 TRMT112Q9UI30 125 aaKnown RBP26.71■■□□□ 1.87
RER1-201ENST00000306256 GJA3Q9Y6H8 435 aa26.71■■□□□ 1.87
RER1-201ENST00000306256 HOXB7P09629 217 aa26.7■■□□□ 1.86
RER1-201ENST00000306256 EIF6P56537 245 aaKnown RBP26.7■■□□□ 1.86
RER1-201ENST00000306256 DUSP27Q5VZP5 1158 aa26.7■■□□□ 1.86
RER1-201ENST00000306256 CREBZFQ9NS37 354 aa26.7■■□□□ 1.86
RER1-201ENST00000306256 CLEC11AQ9Y240 323 aa26.7■■□□□ 1.86
RER1-201ENST00000306256 ATP6V0A2Q9Y487 856 aa26.7■■□□□ 1.86
RER1-201ENST00000306256 SH3TC1Q8TE82 1336 aa26.69■■□□□ 1.86
RER1-201ENST00000306256 PASKQ96RG2 1323 aa26.69■■□□□ 1.86
RER1-201ENST00000306256 APAF1O14727 1248 aa26.69■■□□□ 1.86
RER1-201ENST00000306256 MKRN1Q9UHC7 482 aaKnown RBP26.68■■□□□ 1.86
RER1-201ENST00000306256 PPIP5K2O43314 1243 aa26.67■■□□□ 1.86
RER1-201ENST00000306256 AOC3Q16853 763 aa26.67■■□□□ 1.86
RER1-201ENST00000306256 NIM1KQ8IY84 436 aa26.67■■□□□ 1.86
RER1-201ENST00000306256 PLBD2Q8NHP8 589 aa26.67■■□□□ 1.86
RER1-201ENST00000306256 TMX4Q9H1E5 349 aaPredicted RBP26.67■■□□□ 1.86
RER1-201ENST00000306256 DBF4Q9UBU7 674 aaPredicted RBP26.67■■□□□ 1.86
RER1-201ENST00000306256 PCNTO95613 3336 aa26.67■■□□□ 1.86
RER1-201ENST00000306256 ITGBL1O95965 494 aaPredicted RBP26.66■■□□□ 1.86
RER1-201ENST00000306256 ANKRD13DQ6ZTN6 518 aa26.66■■□□□ 1.86
RER1-201ENST00000306256 ATP5J2-PTCD1G3V325 749 aa26.65■■□□□ 1.86
RER1-201ENST00000306256 ZNF853P0CG23 659 aa26.65■■□□□ 1.86
RER1-201ENST00000306256 HSPA1AP0DMV8 641 aaKnown RBP26.65■■□□□ 1.86
RER1-201ENST00000306256 HSPA1BP0DMV9 641 aaKnown RBP26.65■■□□□ 1.86
RER1-201ENST00000306256 COL13A1Q5TAT6 717 aaPredicted RBP26.65■■□□□ 1.86
RER1-201ENST00000306256 MAP1SQ66K74 1059 aaPredicted RBP26.65■■□□□ 1.86
RER1-201ENST00000306256 PNMA8AQ86V59 439 aaPredicted RBP26.65■■□□□ 1.86
RER1-201ENST00000306256 DDX46Q7L014 1031 aaKnown RBP26.64■■□□□ 1.86
RER1-201ENST00000306256 LRRC37AA6NMS7 1700 aa26.64■■□□□ 1.85
RER1-201ENST00000306256 BBOX1O75936 387 aa26.63■■□□□ 1.85
RER1-201ENST00000306256 LMOD1P29536 600 aaPredicted RBP26.63■■□□□ 1.85
RER1-201ENST00000306256 SCNN1DP51172 638 aa26.63■■□□□ 1.85
RER1-201ENST00000306256 ISCA1Q9BUE6 129 aa26.63■■□□□ 1.85
RER1-201ENST00000306256 HYPKQ9NX55 129 aa26.63■■□□□ 1.85
RER1-201ENST00000306256 EPS15P42566 896 aa26.62■■□□□ 1.85
RER1-201ENST00000306256 GRAPQ13588 217 aa26.62■■□□□ 1.85
RER1-201ENST00000306256 DPP8Q6V1X1 898 aaPredicted RBP26.62■■□□□ 1.85
RER1-201ENST00000306256 SP8Q8IXZ3 490 aa26.62■■□□□ 1.85
RER1-201ENST00000306256 GRAPLQ8TC17 118 aaPredicted RBP26.62■■□□□ 1.85
RER1-201ENST00000306256 FAM89AQ96GI7 184 aa26.62■■□□□ 1.85
RER1-201ENST00000306256 IFT57Q9NWB7 429 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms