RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
MECP2-201ENST00000303391 NUP133Q8WUM0 1156 aa12.47□□□□□ -0.41
MECP2-201ENST00000303391 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
MECP2-201ENST00000303391 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
MECP2-201ENST00000303391 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
MECP2-201ENST00000303391 CLNS1AP54105 237 aaKnown RBP12.46□□□□□ -0.41
MECP2-201ENST00000303391 LRRC45Q96CN5 670 aa12.46□□□□□ -0.41
MECP2-201ENST00000303391 VPS18Q9P253 973 aa12.46□□□□□ -0.41
MECP2-201ENST00000303391 CIB2O75838 187 aa12.46□□□□□ -0.41
MECP2-201ENST00000303391 CCDC160A6NGH7 325 aa12.46□□□□□ -0.41
MECP2-201ENST00000303391 INPP5BP32019 993 aa12.46□□□□□ -0.41
MECP2-201ENST00000303391 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
MECP2-201ENST00000303391 MTIF2P46199 727 aaKnown RBP12.46□□□□□ -0.42
MECP2-201ENST00000303391 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.42
MECP2-201ENST00000303391 TCHPQ9BT92 498 aa12.46□□□□□ -0.42
MECP2-201ENST00000303391 TBC1D5Q92609 795 aa12.46□□□□□ -0.42
MECP2-201ENST00000303391 STRN4Q9NRL3 753 aa12.46□□□□□ -0.42
MECP2-201ENST00000303391 FEZ2Q9UHY8 353 aaPredicted RBP12.46□□□□□ -0.42
MECP2-201ENST00000303391 ACTN2P35609 894 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
MECP2-201ENST00000303391 RAB3GAP1Q15042 981 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 TDRD12Q587J7 1177 aaKnown RBP12.45□□□□□ -0.42
MECP2-201ENST00000303391 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 IL16Q14005 1332 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
MECP2-201ENST00000303391 ZBTB16Q05516 673 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 CTNNA2P26232 953 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 PSME1Q06323 249 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
MECP2-201ENST00000303391 WHAMMP3Q1A5X7 153 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 ELP1O95163 1332 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 CNGA4Q8IV77 575 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 SMC5Q8IY18 1101 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 MTRF1LQ9UGC7 380 aaKnown RBP12.44□□□□□ -0.42
MECP2-201ENST00000303391 SYT1P21579 422 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 ERCC6LQ2NKX8 1250 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 NDC80O14777 642 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 BUB1BO60566 1050 aaPredicted RBP12.44□□□□□ -0.42
MECP2-201ENST00000303391 SLC8A1P32418 973 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
MECP2-201ENST00000303391 TRIM14Q14142 442 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 RBBP5Q15291 538 aaKnown RBP12.44□□□□□ -0.42
MECP2-201ENST00000303391 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 TNNC1P63316 161 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 FAM114A2Q9NRY5 505 aa12.44□□□□□ -0.42
MECP2-201ENST00000303391 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 IRX4P78413 519 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 MAP7Q14244 749 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 CFAP58Q5T655 872 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 RARSP54136 660 aaKnown RBP12.43□□□□□ -0.42
MECP2-201ENST00000303391 MXRA7P84157 204 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 ANO6Q4KMQ2 910 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 USP37Q86T82 979 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
MECP2-201ENST00000303391 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 IMPACTQ9P2X3 320 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 ZNF853P0CG23 659 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 SYKP43405 635 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 KIF5AQ12840 1032 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.42
MECP2-201ENST00000303391 IBSPP21815 317 aaPredicted RBP12.43□□□□□ -0.42
MECP2-201ENST00000303391 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
MECP2-201ENST00000303391 RAD50Q92878 1312 aa12.43□□□□□ -0.42
MECP2-201ENST00000303391 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
MECP2-201ENST00000303391 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 N4BP3O15049 544 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 RPGRIP1Q96KN7 1286 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.42
MECP2-201ENST00000303391 AKR1B10O60218 316 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
MECP2-201ENST00000303391 GJB2P29033 226 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 PPP4R3AQ6IN85 833 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 KIF14Q15058 1648 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 UTP14CQ5TAP6 766 aaKnown RBP12.42□□□□□ -0.42
MECP2-201ENST00000303391 SYNJ2O15056 1496 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 PTPRGP23470 1445 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 RASSF2P50749 326 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 TYRO3Q06418 890 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 SUDS3Q9H7L9 328 aaPredicted RBP12.42□□□□□ -0.42
MECP2-201ENST00000303391 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 PCK1P35558 622 aa12.42□□□□□ -0.42
MECP2-201ENST00000303391 CFTRP13569 1480 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms