RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
IDH3A-201ENST00000299518 KCNJ4P48050 445 aa13.47□□□□□ -0.25
IDH3A-201ENST00000299518 CUL4AQ13619 759 aa13.47□□□□□ -0.25
IDH3A-201ENST00000299518 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
IDH3A-201ENST00000299518 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
IDH3A-201ENST00000299518 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
IDH3A-201ENST00000299518 SIPA1L3O60292 1781 aaPredicted RBP13.47□□□□□ -0.25
IDH3A-201ENST00000299518 ZNF335Q9H4Z2 1342 aaPredicted RBP13.47□□□□□ -0.25
IDH3A-201ENST00000299518 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
IDH3A-201ENST00000299518 BRD1O95696 1058 aa13.47□□□□□ -0.25
IDH3A-201ENST00000299518 CLEC17AQ6ZS10 378 aa13.47□□□□□ -0.25
IDH3A-201ENST00000299518 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.25
IDH3A-201ENST00000299518 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
IDH3A-201ENST00000299518 TTC14Q96N46 770 aa13.46□□□□□ -0.25
IDH3A-201ENST00000299518 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
IDH3A-201ENST00000299518 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
IDH3A-201ENST00000299518 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
IDH3A-201ENST00000299518 FAM173BQ6P4H8 233 aa13.46□□□□□ -0.25
IDH3A-201ENST00000299518 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
IDH3A-201ENST00000299518 DCAF5Q96JK2 942 aa13.46□□□□□ -0.25
IDH3A-201ENST00000299518 HSP90AB4PQ58FF6 505 aa13.46□□□□□ -0.26
IDH3A-201ENST00000299518 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.26
IDH3A-201ENST00000299518 SYNE4Q8N205 404 aa13.46□□□□□ -0.26
IDH3A-201ENST00000299518 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.26
IDH3A-201ENST00000299518 AOX1Q06278 1338 aa13.46□□□□□ -0.26
IDH3A-201ENST00000299518 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 TIMM10P62072 90 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 ST3GAL1Q11201 340 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 STK3Q13188 491 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 CADPS2Q86UW7 1296 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
IDH3A-201ENST00000299518 ANAPC15P60006 121 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 SCN11AQ9UI33 1791 aa13.45□□□□□ -0.26
IDH3A-201ENST00000299518 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
IDH3A-201ENST00000299518 TTC41PQ6P2S7 1318 aa13.44□□□□□ -0.26
IDH3A-201ENST00000299518 COL15A1P39059 1388 aa13.44□□□□□ -0.26
IDH3A-201ENST00000299518 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
IDH3A-201ENST00000299518 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
IDH3A-201ENST00000299518 RFX5P48382 616 aaPredicted RBP13.44□□□□□ -0.26
IDH3A-201ENST00000299518 ME3Q16798 604 aa13.44□□□□□ -0.26
IDH3A-201ENST00000299518 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
IDH3A-201ENST00000299518 USP48Q86UV5 1035 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 COL18A1P39060 1754 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 SYT1P21579 422 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 PUS3Q9BZE2 481 aaKnown RBP13.43□□□□□ -0.26
IDH3A-201ENST00000299518 TNS3Q68CZ2 1445 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 FIBPO43427 364 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 TPCN1Q9ULQ1 816 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 UTYO14607 1347 aa13.43□□□□□ -0.26
IDH3A-201ENST00000299518 ZCRB1Q8TBF4 217 aaKnown RBP13.42□□□□□ -0.26
IDH3A-201ENST00000299518 A0A0G2JS52 829 aa13.42□□□□□ -0.26
IDH3A-201ENST00000299518 NECTIN1Q15223 517 aa13.42□□□□□ -0.26
IDH3A-201ENST00000299518 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
IDH3A-201ENST00000299518 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
IDH3A-201ENST00000299518 TNNI3KQ59H18 835 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 GPATCH3Q96I76 525 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 LIMCH1Q9UPQ0 1083 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 FPGT-TNNI3KV9GXZ4 949 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 GJB2P29033 226 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 FOSBP53539 338 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 HSP90AB3PQ58FF7 597 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 SLC27A2O14975 620 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
IDH3A-201ENST00000299518 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
IDH3A-201ENST00000299518 MCM2P49736 904 aa13.4□□□□□ -0.26
IDH3A-201ENST00000299518 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
IDH3A-201ENST00000299518 CASP7P55210 303 aa13.4□□□□□ -0.26
IDH3A-201ENST00000299518 EVA1CP58658 441 aa13.4□□□□□ -0.26
IDH3A-201ENST00000299518 SMC3Q9UQE7 1217 aa13.4□□□□□ -0.26
IDH3A-201ENST00000299518 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
IDH3A-201ENST00000299518 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
IDH3A-201ENST00000299518 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 FOXO4P98177 505 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
IDH3A-201ENST00000299518 GOLIM4O00461 696 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 STX6O43752 255 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 GPTP24298 496 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 CHST3Q7LGC8 479 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 RUFY2Q8WXA3 655 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 TRIM44Q96DX7 344 aaPredicted RBP13.39□□□□□ -0.27
IDH3A-201ENST00000299518 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
IDH3A-201ENST00000299518 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
IDH3A-201ENST00000299518 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
IDH3A-201ENST00000299518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
IDH3A-201ENST00000299518 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms